Gene Huta_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2484 
Symbol 
ID8384786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2557363 
End bp2558154 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID644973558 
ProductABC-2 type transporter 
Protein accessionYP_003131381 
Protein GI257053548 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.308148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCGGC TGGGCCGAAT CACGAGCGAG ACGCGCGCCG CGACGCGAGC GTTCCTTCGT 
CGCCGGACCG CGGTCTTCTT CACGTTCCTG TTTCCGCTCC TGATCGTCCT CATCTTCGGC
GCGCTGGTCC AGACCCAGCC CACCGGCGGC GGTCTCTTTA CGGAGCCACC AGCCTACTAC
GTCCCGGGGT ATCTCGCGGT CGTCGTCCTC TTTACCCCGC TCTCTCGGGT CGGTAGCGAG
GTCGCGCGCC ATCGCGACGA TCGGCGCTTC GAGAAGCTGG CGACGACGCC GCTGTCGCGG
GCCGAATGGC TGCTCTCCCA GACGCTCGTC AACGTCGCCA TCATCGGCGT CGCGGCCGTG
CTGGTGCTCG CGGTGATGGT GGCCGTCACC GGGGCGACGG TCGCCCCGTC ACCGTGGCTG
GTGCCGTTCC TCGCGATCGG CGTCGCGCTG TTCTGTGGGA TCGGCGCGCT ACTCGGGAGT
TTCACGGACT CCCAGGACGG CGTCATCGCC GCCTCGAACA CGCTTGCCCT CCCGCTGCTG
TTCCTCTCGG AAACCTTCGT CCCGCCGGCA CTCCTCCCGG AATGGTTCCG CCCGCTGATC
GAGCTCTCGC CGCTGACATA CTTCTCGCGG GGCGTCCGAG CGGTCGTGAC CGATCCCGGC
GCGGGCGTCG AGGGAACGGT CGTCGCCGTC TGGCCCGCCG GCCCCGATCC GGCCGCCAAC
CTCGCGATCC TGTCGATGCT GGCGCTCGTC ACGTTCGGAC TCGGAGCACT CACGTTGCCC
CGGACGGACT GA
 
Protein sequence
MSRLGRITSE TRAATRAFLR RRTAVFFTFL FPLLIVLIFG ALVQTQPTGG GLFTEPPAYY 
VPGYLAVVVL FTPLSRVGSE VARHRDDRRF EKLATTPLSR AEWLLSQTLV NVAIIGVAAV
LVLAVMVAVT GATVAPSPWL VPFLAIGVAL FCGIGALLGS FTDSQDGVIA ASNTLALPLL
FLSETFVPPA LLPEWFRPLI ELSPLTYFSR GVRAVVTDPG AGVEGTVVAV WPAGPDPAAN
LAILSMLALV TFGLGALTLP RTD