Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2484 |
Symbol | |
ID | 8384786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 2557363 |
End bp | 2558154 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644973558 |
Product | ABC-2 type transporter |
Protein accession | YP_003131381 |
Protein GI | 257053548 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.308148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCGGC TGGGCCGAAT CACGAGCGAG ACGCGCGCCG CGACGCGAGC GTTCCTTCGT CGCCGGACCG CGGTCTTCTT CACGTTCCTG TTTCCGCTCC TGATCGTCCT CATCTTCGGC GCGCTGGTCC AGACCCAGCC CACCGGCGGC GGTCTCTTTA CGGAGCCACC AGCCTACTAC GTCCCGGGGT ATCTCGCGGT CGTCGTCCTC TTTACCCCGC TCTCTCGGGT CGGTAGCGAG GTCGCGCGCC ATCGCGACGA TCGGCGCTTC GAGAAGCTGG CGACGACGCC GCTGTCGCGG GCCGAATGGC TGCTCTCCCA GACGCTCGTC AACGTCGCCA TCATCGGCGT CGCGGCCGTG CTGGTGCTCG CGGTGATGGT GGCCGTCACC GGGGCGACGG TCGCCCCGTC ACCGTGGCTG GTGCCGTTCC TCGCGATCGG CGTCGCGCTG TTCTGTGGGA TCGGCGCGCT ACTCGGGAGT TTCACGGACT CCCAGGACGG CGTCATCGCC GCCTCGAACA CGCTTGCCCT CCCGCTGCTG TTCCTCTCGG AAACCTTCGT CCCGCCGGCA CTCCTCCCGG AATGGTTCCG CCCGCTGATC GAGCTCTCGC CGCTGACATA CTTCTCGCGG GGCGTCCGAG CGGTCGTGAC CGATCCCGGC GCGGGCGTCG AGGGAACGGT CGTCGCCGTC TGGCCCGCCG GCCCCGATCC GGCCGCCAAC CTCGCGATCC TGTCGATGCT GGCGCTCGTC ACGTTCGGAC TCGGAGCACT CACGTTGCCC CGGACGGACT GA
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Protein sequence | MSRLGRITSE TRAATRAFLR RRTAVFFTFL FPLLIVLIFG ALVQTQPTGG GLFTEPPAYY VPGYLAVVVL FTPLSRVGSE VARHRDDRRF EKLATTPLSR AEWLLSQTLV NVAIIGVAAV LVLAVMVAVT GATVAPSPWL VPFLAIGVAL FCGIGALLGS FTDSQDGVIA ASNTLALPLL FLSETFVPPA LLPEWFRPLI ELSPLTYFSR GVRAVVTDPG AGVEGTVVAV WPAGPDPAAN LAILSMLALV TFGLGALTLP RTD
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