Gene Huta_2483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2483 
Symbol 
ID8384785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2556458 
End bp2557336 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content68% 
IMG OID644973557 
Productaminotransferase class IV 
Protein accessionYP_003131380 
Protein GI257053547 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.196107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTACC ACGTCGACGG CGAACTTGTC CCGGCCGAGG AGGCCAGCGT CAACGTGCGC 
GACCGCGGCT TCATGTACGG CGACGCGGCC TTCGAGACGC TCCGGGCCTA CGGCGGCGAG
GTTTTCGCCT GGGACGCCCA CGCCGACCGG CTCGAACGCA CCTGCGAGAC GCTCGGCTTC
GCCCGGGCGA TCCCGCCGCG TGCGGACCTC CGCGAGCGAA TCGCGGAGAC GCTTGCGGCA
AACGACCTCA CCGACGCCTA CGTTAAGCTC TCGATCTCAC GTGGCGTCCA GGCCGGAAAG
CTCACCCCGG ATCCCGCTGT CGACCCGACG ATAGTCGTGA TTGTCGACTC GCTTCCCCGG
GGAGGAATCG ACGGCGATCC GGTCTGGGAC GACCCGGCGA CAGTCCGGAC GGTCGAGACC
CGGAAGATCC CCGACGCTGC GCTGCCGGCG GATACCAAGA CGCATAATTA TCTCAACGGG
ATTCTCGCCC GGCTCGAACT CCAGCAGGAG GCCAGTGGCG ACCCGGCCGA CGAAGCACTC
CTGCTCGACA CCGACGGGTA TCTCGCGGAA GGGGCGACGA GCAACCTCTT CTTCGTGGCG
GATGGCGTCG TCCACACGCC GACGACCGAC CAGCCGATCC TGCCCGGCGT GACCCGCTCG
ATCGTCCTGG ATCTCGCTCG CGAGGAAGGA CTTCCTGTCG AGACCGGCCC TTACGAGCGC
GATGACCTGC TGGCTGTCGA CGAGGCCTTC CTGACGAACA CGACCTGGGA ACTCCGCCCG
GTCGGGGCCG TCGACGGCGA GTCCATCGGC GGCGGCCCGA TCACGCGGCT GCTCTCCCGA
CTCTACGATC GGCGCGTCGA GCGCTCGTGT TACGAGTGA
 
Protein sequence
MEYHVDGELV PAEEASVNVR DRGFMYGDAA FETLRAYGGE VFAWDAHADR LERTCETLGF 
ARAIPPRADL RERIAETLAA NDLTDAYVKL SISRGVQAGK LTPDPAVDPT IVVIVDSLPR
GGIDGDPVWD DPATVRTVET RKIPDAALPA DTKTHNYLNG ILARLELQQE ASGDPADEAL
LLDTDGYLAE GATSNLFFVA DGVVHTPTTD QPILPGVTRS IVLDLAREEG LPVETGPYER
DDLLAVDEAF LTNTTWELRP VGAVDGESIG GGPITRLLSR LYDRRVERSC YE