Gene Huta_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2477 
Symbol 
ID8384779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2550538 
End bp2551884 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content64% 
IMG OID644973551 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_003131374 
Protein GI257053541 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGGCAG TCGCCGCTGC ACTGGTACTG ACGCTGCCGT GGGTCGTCGT CGAACTGTCA 
CGGCTCGCCG CTGGACTCGA CTGGATGCCG ATCGACGCCG GGATCGCGCT CTCGACGGGC
CCGACCGTCC TGGTGACCGG CCTGGCCGTC GTCGGCGCGT CGTTCCTGCT CGCGTGGGGG
GCCGAAACAG CCGAGAAGGA CGTCCCCCGG GCGTTCGCCC TCGCCGTCCT CGCGGTCCTC
GCCGTCGCCC CGGAGTACGC CGTCGACGCG CTGTACGCCT GGGACGCCGG GGCGCAAGCC
GGGACCACCG CGGGCGCGGA GGCCGGCAAC CTCGCCATCG CGAACATGAC GGGAGCCAAC
CGGATTCTGA TCGGCCTGGG TTGGTCCGGG ATCGCGCTGT TCACCGTCTA TCGCGCCTAC
AAGGTTCGGG ACGACAACGT CGAGAAGCGA TCCGGCTTCC TCGCCGATGT CGTGACGCTC
GATAAGGCGC TGACGACCGA AATCACGTTC CTCTGGCTGG CGACGCTGTG GGCGTTTCTG
GTCCCACTCG GTGGCGGCAT CGACCTGATC GACACCGTCG TCCTCGTCGG CCTGTACGCG
AGTTACATCC TGATCATCAT CCGCTCCGGC ATCGAAACCG AAAAAGAGCA GATCGGTGTC
CCGGGCTATC TTCAATCCTA CCGCAAACCA AAGCGGATCG CAACCGTCCT CTCGCTGTTC
ATCTACTCGG GCGTCATGAT CCTGATCGCC GTCGAACCGT TCGCCCACGG CCTCGAAAAC
CTCGGCCTGC AGTACGGCGT GCCGAAGTTC TTCATGATCC AGTGGATCGC CCCGCTGGCA
AGCGAGTCAC CCGAGTTGAT TGTCGTCGTC TATCTCGTCA ACAAAGCCCG ATCCTCGGCC
GGGTTCAACG CCCTGATCTC CTCGAAACTC AACCAGTGGA CGCTGTTGAT CGGGACGCTC
GCGATCGTCT ACTCGATCGC GGCGGGCGGG GTCGGCGTCC TCGAATTCGA CTACAAGCAG
AGCCTGGAGA TCTGGATCAC GGCCGCCCAG TCGTTCTTCG CGCTGGCGAT CCTGGTCAAC
TTCAACATCA GCCTCCGGGA GGCCGTCGCG TTGCTCGTGT TGTTCGTCAG CCAAGTGTTC
GCCGAGTTCA TGGTGTTGAA CGTCCTTTCG CTGTCCCATC CCGAAGCACT CAGCCACCAG
ATCCTGCTCG GCTACACCGC CGTCTACCTC CTCATCGGGC TGGCGATGTT CGTCCGCCGC
CGCAAGGCTG TCAAGGAGAT GCTCGGCATG ACCTACGAAG TAGTCCAGAC GGCGTTCGGT
CGCCGGAGCG ACTTCGATAT CGAGTAA
 
Protein sequence
MTAVAAALVL TLPWVVVELS RLAAGLDWMP IDAGIALSTG PTVLVTGLAV VGASFLLAWG 
AETAEKDVPR AFALAVLAVL AVAPEYAVDA LYAWDAGAQA GTTAGAEAGN LAIANMTGAN
RILIGLGWSG IALFTVYRAY KVRDDNVEKR SGFLADVVTL DKALTTEITF LWLATLWAFL
VPLGGGIDLI DTVVLVGLYA SYILIIIRSG IETEKEQIGV PGYLQSYRKP KRIATVLSLF
IYSGVMILIA VEPFAHGLEN LGLQYGVPKF FMIQWIAPLA SESPELIVVV YLVNKARSSA
GFNALISSKL NQWTLLIGTL AIVYSIAAGG VGVLEFDYKQ SLEIWITAAQ SFFALAILVN
FNISLREAVA LLVLFVSQVF AEFMVLNVLS LSHPEALSHQ ILLGYTAVYL LIGLAMFVRR
RKAVKEMLGM TYEVVQTAFG RRSDFDIE