Gene Huta_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2456 
Symbol 
ID8384758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp2532796 
End bp2533362 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content62% 
IMG OID644973531 
Producttranscriptional regulator TrmB 
Protein accessionYP_003131354 
Protein GI257053521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.189668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACCG AGCACCGCCT CGCCGACGCT ACCGATCCGG AAGCGACGGT CGGTAATCTT 
CTCACTTACG CGGAGTTGCT CAACACGCCG AAACTGGCGC GACTCTACGT CTACGTGCTC 
CGGAACGGCC CCGTCGCGAT AGAGACCGTC AAAGACGATC TCGAGTTGCC ACACTCGACG 
ACCTACAAGT ACGTCGGCGA ACTCGAGGAG ATGGGCGTCC TCACTCGCCA CGAGGAGGCG 
ACGCCGACGA CGATCGAGGT CGAACCGATC CGACTGACGA TGGAGACTGA TCACGGCGAT 
GTCGTGGTAA AACCCGTCCT CGTCGACGCG ATCGCTCGAC AGCATGACAC CGAGGACATC 
CGCGTGTTCG TCGAGCGTCA GGGGATCCCG AAACTCGCCG CCGCGTTGCA CTACACGCTG 
CACGTGATGG ACGGCGACCT CACCCAGCGC ACTGCCGCCA ATAAACTCGA TGTCCATCCG 
GTCGAGGGGA TGACCGTGAT CACTGCCCTT CAGGACGTCG TCGAGGCGGC CGAAGCCTAC 
GATCCGTATC TGGACATTGG CGAGTGA
 
Protein sequence
MSTEHRLADA TDPEATVGNL LTYAELLNTP KLARLYVYVL RNGPVAIETV KDDLELPHST 
TYKYVGELEE MGVLTRHEEA TPTTIEVEPI RLTMETDHGD VVVKPVLVDA IARQHDTEDI 
RVFVERQGIP KLAAALHYTL HVMDGDLTQR TAANKLDVHP VEGMTVITAL QDVVEAAEAY 
DPYLDIGE