Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2439 |
Symbol | |
ID | 8384741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 2508728 |
End bp | 2510185 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644973515 |
Product | MATE efflux family protein |
Protein accession | YP_003131338 |
Protein GI | 257053505 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.739641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGACA TCGCGTGGCC GCTGGTCGTC TTCCAGTTGC TGAACGTCGC CTATAACGTG ACCGACACCA TCTGGCTCGG CCATTACTCG GCCGACGCGG TCGGTGCGCT GAGCATCGCG TGGCCGCTGA TCTTCCTGTT CATCTCGATC GCGGGCGGGT TCAACTCCGC GGGGGCGATC CTGGTCGCCC AGTACACCGG CGCGGATAGC GAGGGGTCGG CCGGACTCGT GACGGGCAAC CAGCTGGTGT TCGTCGTCGG GATGGCGACT GTCCTGGGCG TCGCCGGCTT TTTCCTCTCC GATCAGCTGC TCGCACTGTT GCCCTCGAGT GCGGACACGA CCGAGCGGAT CATCCCGATG GCCAACGACT ACATGGAGGT GTTCTACCTC GGGCTCCCGC TTTTGTTCTC GTTTTTCGTC TTCTCGTCGG TCATGCGCGG GTACGGCGAC ACCAAGACGC CGATGTACGT CATGGCCGGC AGCGTCGGAC TGAACGTCGT GATCGACCCG ATCCTCATCT TCGGGTTTGC CGACAACCCG CTGTTCGCGC CGCCGGGACT CGACGTGATC GGCGCGACGC TCGCGGAGCT GACGGCCTTC GGCGGGTTCG GGATCCAGGG AGCCGCCATC GCCACCATCT CCTCGCGTGG GCTGGCGGCG GTCGCCGGCA TCCTCCTCCT CTTTTTCGCC GGCTACGGTC CGGACGTCCG GCTGGAACAC TTGCGGCCGG ACTTCGGCGT GATTCGGAAA ATGGTCGACC TCGGGTTGCC GACGACCGCC GAACAGTCGG CCGCGGCGCT GGGCATGATC ACCATGACCG CGATGGTGTC GATGTTCTCG CCGGCGGTCG TGGCGGCCTA CGGCCTCACC AACCGGATCG GGACGATCGT CTTCCTGCCG TCGATGGGAC TGGGGCGGGC AACCAACACA ATGGTCGGCC AGAATCTGGG AGCCGAAAAG CCCGACCGCG CCGAGCGGGC AACCTGGGTC GCCTCGAAGG TCATCGTCGG CGTCCTCTTT GTCGCCGGCG CAATCGCGTT CATCTTCCCC GAACCGATCG TCGGCGTGTT CCTCGGGACG GGCACCGAGG AGGCGGCGAT CACGCTTGCC TTCGCCGCGA CGTACCTCCA GGTCAGGGCC TTCGAGTTCG TCTTCATGGG CGTCTTCCAG GTCATGCTCG GCGCGTTCCG GGGAGCAGGA AACACCCGGA CGGCGATGGT CCTCTCCGTC ATCGCGCTAT GGCTCGGCCG CGTCCCACTG GTATATCTCC TCGCGGTCGA CCCCGGCATC CTTGGCGAGT TCGGCATCTG GATCGGGTTC GCCGCCGGCG ACATCCTCGG CGGGATCGTC GCCGTCCTGT GGTTCACCCG CGGAACCTGG AAGGAAGCCG TCATCGAGGA GACCGGTCCG GACAGCGAGC CAGCGGCCGA GCCGCCCGAG GCGGTCAATA CGGACTGA
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Protein sequence | MLDIAWPLVV FQLLNVAYNV TDTIWLGHYS ADAVGALSIA WPLIFLFISI AGGFNSAGAI LVAQYTGADS EGSAGLVTGN QLVFVVGMAT VLGVAGFFLS DQLLALLPSS ADTTERIIPM ANDYMEVFYL GLPLLFSFFV FSSVMRGYGD TKTPMYVMAG SVGLNVVIDP ILIFGFADNP LFAPPGLDVI GATLAELTAF GGFGIQGAAI ATISSRGLAA VAGILLLFFA GYGPDVRLEH LRPDFGVIRK MVDLGLPTTA EQSAAALGMI TMTAMVSMFS PAVVAAYGLT NRIGTIVFLP SMGLGRATNT MVGQNLGAEK PDRAERATWV ASKVIVGVLF VAGAIAFIFP EPIVGVFLGT GTEEAAITLA FAATYLQVRA FEFVFMGVFQ VMLGAFRGAG NTRTAMVLSV IALWLGRVPL VYLLAVDPGI LGEFGIWIGF AAGDILGGIV AVLWFTRGTW KEAVIEETGP DSEPAAEPPE AVNTD
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