Gene Huta_2397 details

Gene Information

• Locus tag: Huta_2397
• ID: 8384696
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2454519
• End bp: 2456531
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644973470
• Product: PKD domain containing protein
• Protein accession: YP_003131296
• Protein GI: 257053463
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.861546
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACGGG AGACAGACGG AAACGACCGC GAACGGGCAT CGAACCTGAC GCGCCGGCGG 
GTGCTGCAGG CTGGGGCCAG CGGACTCCTC GCCGCGACCG TCGGGACATC GGCACTCACC 
GCAACGGCTG GCGCGGTCAC CACTGCGCGG ATCAGCCCAA GCGACGGGTT CGCAGCTGTC 
GGGGACTGGC TCGAAGACGA CGAGCCGGAA ATCTACCGGA TTCAGGAGCC GACACGTTCG 
GCCGTCGAGG CGGCCTTCCA GGCGTCGGGG CCGCGTGTGG TTGTCTTCGA GACCAGCGGG 
ACGATCGATC TCGGCGGTGA GGCGCTCGCG ATCACCGAAG ACAAGTGCTG GGTCGCGGGT 
CAGACGGCTC CCTCGTCCGG TATCACGTTC GTCAAGGGGA TGGTACAGGT CGACGCCGAC 
GACTGCGTCG TTCAGCATAT CCGAACCCGG CACGGCCCCG GTTCTGACGG GGAGATCCAG 
AGCAACGACT CGCTCAACAC GGCCGACGAT ACGTCGAACA ACGTCATCGA TCACGTCACG 
GCCTCCTGGG GCACCGACGA GTGTCTCTCG GTGGGGTACG ACACCACCGA CACGACGGTC 
ACGAACTGCC TGGTGTACGA GGGGCTGTAC GATCCCTACG GCGACAGCTC GGATCACAAC 
TACGCCACGC TGGTCGGCGA CGGTGCCGAG AACGTCACGC TGGCGGGCAA CGTCTGGGCG 
AAGTGTCGCG GTCGAGTCCC GCGATTGAAG AGCGAGACTC GGAGCGTCGT CGCGAACAAC 
GTGATGTACT TCTTCAACGA GGCGACCAAC ATGGACGGCG ACACGGCGGC CGCCATCGTC 
GGGAACGTCT ACATCCCCCA GGACGTCGAT GATACGCCGA TCGAGGACGG CAACGCCTCT 
CTCTCGGACA ACGTCACGGA CCCGAGTTCG ACGCCGCTAA CGGGTGGGAC CGAGGAGCTG 
TCGAGTCGGC CGCTCTGGCC CGCCGGGTTC GAGACATTGG ACGTCAGTGG CGTCGAATCA 
CACAATCTCT CGAACGCCGG CGCACGACCG GCCGATCGGA CCGACAACGA CGCCCGGATC 
GTCTCCGAGA TCCGGGATCG CGCCGGCGAT GACTACCTCG ACTCGCCATA CGATTACTGG 
GTCCCGCATC CAGATGCCGT CGGGGGATAC CCTGACCTGC CTGTCAACAC CCACTCGCTT 
TCGGTTCCCG ACACCGGCCT GCGTGAGTGG CTCACTGAAT GGGCCGCCGC CGTCGAAGAC 
GCCAGCGCTG ATCCCGGTAC CGGCGGGGGC GAAAGCGACG AGGGTGACGG CAATTCGGGA 
AGCGACGACG GCAGCGGTGA CGATTCCGGC GGTGACGATG GCAGTGATGA CGGGAGCGGT 
GACAGCACCG ACTGTGAGCC GACTACGATC GAGCCGTATC TGCGCGTCGA CGGCGGCGAC 
TGGCAAAATA CCGGCGAGGT GACCGTCGAA CCCGGTGGGT CCGTCGAGTT CGGGCCACAT 
CCACACGACG GAACCGACGA CTGGGTCTGG AACGGGCCGG GGCTCTCGGC CACGACGCGG 
GAAGTCGTCG TCGAGCCCGA CGCGACGGCG ACGTACACCG CAGCCTACAC CAACGACTGT 
GGAGCTGTTT CCGAGTACGA GTTCGTCGTG ACTGTCGAGG AACGTGACGA CGGAGCTGAC 
AGCGACAGCG GCGGTGACGG GAGCGGTACG GATGGCAGTG GTGGTGACGG GAGTGGGGAC 
GACGAGACGA GTAGCGATGA TCTGATCGCC GAACTCGATC CGGGGACGAC GGATGCAGCT 
GTCGGCGAGT GGATCCCGTT CGCGATCGTC GATACCACTG ACAGTGATCA CTGGATCACG 
GGCCTGTCCT GGTCCTTCGG CGACGGAACC ACGGCGACTG GGTGGTGGAA CGCCCACACC 
TACGACACAG CGGGAACGTA CCCGGTCTCG CTGACCGCGA CCAACGACGC CGGTGAATCG 
ACGACTCACG AGGTGAGTAT CACCGTGACG TGA 

 

Protein sequence

MTRETDGNDR ERASNLTRRR VLQAGASGLL AATVGTSALT ATAGAVTTAR ISPSDGFAAV 
GDWLEDDEPE IYRIQEPTRS AVEAAFQASG PRVVVFETSG TIDLGGEALA ITEDKCWVAG 
QTAPSSGITF VKGMVQVDAD DCVVQHIRTR HGPGSDGEIQ SNDSLNTADD TSNNVIDHVT 
ASWGTDECLS VGYDTTDTTV TNCLVYEGLY DPYGDSSDHN YATLVGDGAE NVTLAGNVWA 
KCRGRVPRLK SETRSVVANN VMYFFNEATN MDGDTAAAIV GNVYIPQDVD DTPIEDGNAS 
LSDNVTDPSS TPLTGGTEEL SSRPLWPAGF ETLDVSGVES HNLSNAGARP ADRTDNDARI 
VSEIRDRAGD DYLDSPYDYW VPHPDAVGGY PDLPVNTHSL SVPDTGLREW LTEWAAAVED 
ASADPGTGGG ESDEGDGNSG SDDGSGDDSG GDDGSDDGSG DSTDCEPTTI EPYLRVDGGD 
WQNTGEVTVE PGGSVEFGPH PHDGTDDWVW NGPGLSATTR EVVVEPDATA TYTAAYTNDC 
GAVSEYEFVV TVEERDDGAD SDSGGDGSGT DGSGGDGSGD DETSSDDLIA ELDPGTTDAA 
VGEWIPFAIV DTTDSDHWIT GLSWSFGDGT TATGWWNAHT YDTAGTYPVS LTATNDAGES 
TTHEVSITVT