Gene Huta_2394 details

Gene Information

• Locus tag: Huta_2394
• ID: 8384693
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2445728
• End bp: 2447683
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644973467
• Product: Fibronectin type III domain protein
• Protein accession: YP_003131293
• Protein GI: 257053460
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2730] Endoglucanase
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.253992
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAAAG ACCGTTCGAC GGAACGAACC GAAACTGACG AATCGACGAC TGAACGAGAC 
GAATTCACGC AGGAGGGCCC CGAGACGTAT CGGGCAGGGA TATCCAGACG GTCGTTTCTG 
CAGACGACCG CGGCTGCGGG ACTGGTCGGC CTGGGCGTCG GGAGTGGCGC TGTCGGCTCA 
GCGGCTGCAG CCGGTATTCC AACGCCGTGG CTCGAAGTCG ATGGCAATCT CCTGCGGGAT 
CCCGACGGCA ACAAGGTGAT CCTGCGGGGT GTGAACGTTA TCGACCCCGC GCGGGCGGCC 
AAGGAGTGGC GCAAGAACAT CGAGCCGCTG ATCGAGTTGG CGACCGATCC GGGCGAGGGC 
TGGCACGCCC ACGTCATCCG GCTCCCGATG CAGCCTCAGG ACATCGGCGA TCATGGTCCG 
GGGACGGCGG CCCCGACGCC GGGATTCACG CAGGACGAAC TCCAGAATTA TCTCGCGGAG 
TACGTCGATC CGGCGGTCGA CGCGGCCGAG GACGTCGGCG CGTACATCAT GCTGGATTAC 
CATCGCCACT ATCCGGAGGG GCCCGACTGG GACTCGCCGG AACTCGACGA GGAGATCCGG 
TTGTTCTGGA ACGAGGTCGC CCCGCGCTAC AGCGATCGTT CCCACGTCAT CTACGAACTG 
TACAACGAAC CGAACACGCC GTATCCGGGG GCCGGCGATC CGACCGACGA CGTTGGCGTC 
ACGGACGCTC GTGCCGAGGA GAACTACCTC TACTGGCGCG AGACGGCCCA GCCGTGGGTC 
GATCTCATTC GGGAGCACGC GTCCCGGAAC CTGATCGTCA TCGGGTCGCC GCGCTGGAGC 
CAGTTCACCT ACTGGGCGGG CGAACACGAG TTCGAGGGCG ACAATCTCGC GTATGCGGGC 
CACGTCTACG CCCACGAGAA CCTCCGGCCG CTATCGACGT ACTTCGGCGA GCCCTCAGAG 
GAGGTTCCGG TGTTCATGAG CGAGTTCGGG TACGGGACCG AGGGCTCGCC CTACCTCGTC 
GGGACCAACG AAGTCGAGGG CCAGCAGTTC CTCGACCTCT TCGACGCCCA CGACATCCAC 
TGGCAGGCCT GGTGTTTCGA CCACACGTGG TCGCCCGGCA TGTTGAATCG GGATTACGAG 
GTCGACAGTC CCCACGGTCG GCTGTTCAAG GAGCGACTTC GCGAGAAGCG CAACGACGAC 
CTGCCGGCGA GCGCCGGCGG TGGCGACGAG ACGCCGCCCT CGGCCCCGTC GAACCTCGCC 
GTGACCGAGA CGGGCAGCGA GAGTGTCGGT CTGGCGTGGG ACGCCGCGAG TGATTCCGGC 
GACTCCGGCC TCGCCACTTA TGCCGTCTAC CTCGACGGCG CGCTGGATCA TCGGGTCACT 
GCCGGGACGA CCGCTACAGA AGTCAGCGGC CTGCTGCCGG AGACGACCTA CGAGTTCGCC 
GTCAGTGCCG TCGACGGCGC GGGCAACGAG TCCGACAGGA GCGGGGTCGT CACCGCCACC 
ACCGATCCGC CGGCCAGCGA GCGCCTGGTC CTCAACGACT TCGACGGCGA CCCGGCGTGG 
GCTGACAGTC GCAACGAACT CGGGAACTGG TGCGGTGCCG GTTCCTTCGC AAACGACGAC 
GGCGAGGTCG TGGACGGCGC ACTCGTCCTC GAATACGACG GCGGCTGGCT GCAGTCGTAC 
GTTCGCCAGG ATGTCTCGTC GTTTTCGACG CTGAATCTGC AGGTTCGCGG TGCCGACGGT 
GGCGAGGAGT CGGCCTTCGC GGTGGAACTC GGCGGCGGGG GCGGCGTGCT CGCCGAAATC 
ACCGACGACA CGATCGGCAC GTCGTTCTCG ACAGTATCGA TCGACATGGC CGCCGCCGGG 
ATGGACGGGG CGAGTCCCGG CGCGGTATAT CTCGACTTCT GGTCGGGTGA CGGAACGAGT 
GGAACGATCG AGATCGACGA AATCTGGTTC GAATAG 

 

Protein sequence

MTKDRSTERT ETDESTTERD EFTQEGPETY RAGISRRSFL QTTAAAGLVG LGVGSGAVGS 
AAAAGIPTPW LEVDGNLLRD PDGNKVILRG VNVIDPARAA KEWRKNIEPL IELATDPGEG 
WHAHVIRLPM QPQDIGDHGP GTAAPTPGFT QDELQNYLAE YVDPAVDAAE DVGAYIMLDY 
HRHYPEGPDW DSPELDEEIR LFWNEVAPRY SDRSHVIYEL YNEPNTPYPG AGDPTDDVGV 
TDARAEENYL YWRETAQPWV DLIREHASRN LIVIGSPRWS QFTYWAGEHE FEGDNLAYAG 
HVYAHENLRP LSTYFGEPSE EVPVFMSEFG YGTEGSPYLV GTNEVEGQQF LDLFDAHDIH 
WQAWCFDHTW SPGMLNRDYE VDSPHGRLFK ERLREKRNDD LPASAGGGDE TPPSAPSNLA 
VTETGSESVG LAWDAASDSG DSGLATYAVY LDGALDHRVT AGTTATEVSG LLPETTYEFA 
VSAVDGAGNE SDRSGVVTAT TDPPASERLV LNDFDGDPAW ADSRNELGNW CGAGSFANDD 
GEVVDGALVL EYDGGWLQSY VRQDVSSFST LNLQVRGADG GEESAFAVEL GGGGGVLAEI 
TDDTIGTSFS TVSIDMAAAG MDGASPGAVY LDFWSGDGTS GTIEIDEIWF E