| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2390 |
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| Symbol | |
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| ID | 8384689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2437095 |
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| End bp | 2438666 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644973463 |
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| Product | Carbohydrate-binding family V/XII |
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| Protein accession | YP_003131289 |
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| Protein GI | 257053456 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3979] Uncharacterized protein contain chitin-binding domain type 3 |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01634] phage tail protein, P2 protein I family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.254143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGAC GCACGAACGA TACCGGCGAA GTAGATGAGA AACCAAGTAG CGGTGCTGAG
CAGCAAGGTT CGAACGACTC GACCGGCTCC AGGGACCCGT CTCGACGTGA CTTCCTGAAG
GCCGGTGCCG CGGTCGGTGC AGGGACGTTC GCGGTCGGAC TCGGGCAGCA GGCCACGGCG
ACCACGGCGA CGGACCCGTC GAATCTTGAT CTGTACCTGC TGTTCGGCCA GTCGAACATG
GAGGGACAGG GACCGATCGA AGCCCAGGAC AGGGAGACCC ATCCGCGGAT CCACGTCCTC
GCTGACAAGA CCTGTCCGAA CCTCGATCGC GAGTATGGCG AGTGGTATCT GGCCGAACCG
CCGCTCAACC GATGCTATGG GAAGCTCGGT CCCGGCGATT ACTTCGCGAA GTCCATGATC
GAGGAGATGC CGGACGACCG GTCGATCGGT CTCGTTCCCG CAGCCGTCAG CGGGGCCGAC
ATTGCTCTCT TCGAAAAGGG GGCACCGATC GGTCGGAACG ACCGCGACAT CCCCTCCCAG
TTCGACGGCG GCTACGAATG GATGGTCGAT CTTGCCGAAA CGGCCCAGCA AGTCGGGACG
TTCAGGGGCA TTCTGTTCCA CCAGGGCGAG ACGAACACGA ACGATCAGCA GTGGACCGAT
CAGGTCCAGG GTATCGTCGA GGATCTCCGC GCCGACCTCG GTATCGGCAA CGTCCCGTTC
CTGGCGGGTG AGATGCTCTA TGACTCGGCT GGGGGGTGTT GTGGCTCGCA CAACACTGAA
GTCAACGAAC TCCCGGACGT CATCGAGAAC GCTCACGTCG TCTCGGCTGA AGGACTTGCC
GGCCAGGATT ACGCGCACTT CACGTCCGAA GCGTATCGAG AACTCGGCCG TCGCTACGCT
GCGGAGATGC TGGAACACGT CGACGTCAGC GGCGGGACCG ACGACGGATC CGGCGGCAAC
TCCGGTGATG ATTCGGGTGG CAACGATGGC GATGGGTCGG GCAGTGACTC CGATGATGAC
TCGGACAGTG ACACTGGCGA CTCCGGCGAT GATTCGGGCA GTGATACCGG CGATAGTTCG
GGCGATGACG CCGGTAGCGA CTCAGGGGGT TCCAGCGAGT ATCCCACGTG GGATTCAACT
GCCGTTTATC GCACCGGCGA TCGGGTCGTC CACGACGGAC GCGTCTGGGA GGCCCAGTGG
TACACCCAGG ATCAGGAACC CCGCGAGGAG GACTACTACG TCTGGCAACC TGTCGAGGAC
GAAAGCGCCG GTAATTCCGG CGGTGACACC AGCGGGGAAT CGGGTGGTGA CACCGGTAAC
TTGAACGCCG AGATGGATCC GAGCACGACA GCGGCCAGTG TCGGTGAGCG GGTCACGTTC
CGCGTCACCG ACACGAGCGG TTCGAGCAAT TGGCTCACTT CTCTGGCGTT CGATTTCGGA
GACGGGATGA CAGCCACCGG GTGGTGGGCT GCCCATTCCT TCGATTCGCC GGGCACCTAC
ACCGTCACGC TCACCGCGAC CGACAACGGG GGTGCATCGA CCACTCACGA GGTGACGATC
ACGGTCTCGT AA
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| Protein sequence | MTRRTNDTGE VDEKPSSGAE QQGSNDSTGS RDPSRRDFLK AGAAVGAGTF AVGLGQQATA
TTATDPSNLD LYLLFGQSNM EGQGPIEAQD RETHPRIHVL ADKTCPNLDR EYGEWYLAEP
PLNRCYGKLG PGDYFAKSMI EEMPDDRSIG LVPAAVSGAD IALFEKGAPI GRNDRDIPSQ
FDGGYEWMVD LAETAQQVGT FRGILFHQGE TNTNDQQWTD QVQGIVEDLR ADLGIGNVPF
LAGEMLYDSA GGCCGSHNTE VNELPDVIEN AHVVSAEGLA GQDYAHFTSE AYRELGRRYA
AEMLEHVDVS GGTDDGSGGN SGDDSGGNDG DGSGSDSDDD SDSDTGDSGD DSGSDTGDSS
GDDAGSDSGG SSEYPTWDST AVYRTGDRVV HDGRVWEAQW YTQDQEPREE DYYVWQPVED
ESAGNSGGDT SGESGGDTGN LNAEMDPSTT AASVGERVTF RVTDTSGSSN WLTSLAFDFG
DGMTATGWWA AHSFDSPGTY TVTLTATDNG GASTTHEVTI TVS
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