Gene Huta_2387 details

Gene Information

• Locus tag: Huta_2387
• ID: 8384686
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2430763
• End bp: 2432874
• Gene Length: 2112 bp
• Protein Length: 703 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644973460
• Product: Fibronectin type III domain protein
• Protein accession: YP_003131286
• Protein GI: 257053453
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGATC CAGACAGACC GCCTACCGGA GACAGAGAGG CATCGCAATC GAACACAACT 
ACCGGCGGCG AGGGACCGTC GCGACGGACC TTCCTCAAGA GTAGCGTGCT GACCGGCGCA 
CTCACGTTCG GCGTCGGGGC GGGCGCGCTG GGGAGTGCAT CCGCCGCGAT CCCGACGCCA 
CAGCTCCACC GTGACGGCAA CCTGATCAAG GATCCCGATG GCAACACCGT CACGCTGCGC 
GGCGTCAACA TTGCCGATCC TAAGCGGATC AACGAGACCG CCCAAGCGCG CGGGATGACG 
GCGACGCAGG TCATCGACAT GCTCACCGAC GAGAGCAACG GCTGGTATCC GCGGATGATT 
CGCGTCCCGG TCCAGCCGGT CGACATCGGC GAGTATGAAC CCGGTTCGGG ACCGCCCGTC 
CCGGCGTTCA ACGAGAGCGA GCTCGAATCG TATCTCAGCA ATCACCTCGA CGAGGTCGTT 
CAACGCTGTG CCGACCGTGG CGTCTACTGT ATCATCGACT ATCACCGCCA CCGCGACGTC 
CAGTGGGCGG AGGGCCAGGA CGGCCCCGTC AACACCGAGC TCCAGGACGA GGTCGACATG 
TTCTGGGACA CGGTCGCGCC GCGGTACGCC GACCAATCGC ACGTCCTCTA TGAGGTGTAC 
AACGAACCCA CCGAGCCTGG GATGTGGGAG GATCCCACGA CCACCCAGTG GGTCGCCGAC 
ATCTGGCAGC TCTGGCTCGA GATGGCCCAG CCGTGGGTCG ACACGATCCG GAGTCACGCG 
GACAACCTGA TCCTGATGGG CTCGCCCAGT TGGTCCCAGA GCCCGGAAGG CGCCCTCGTC 
GAGGAGTTCG ACGGCGAGGA CATCGCCTAC ACCTTCCACA TCTATCCGGG TCACAACTCC 
AGCCAAAACC AGAACTGGGA GGACGCCTCG AACAACGGCG AGGGCGTCGC CGGCGTCTAC 
GAGGAGGCCC CCCTGTTCGT GACCGAGTTC GGCTGGGAAG AGAACGGCGG ACAGTATATC 
GGCGGGACCG ACGACTTCGG GACCGCCTTT CTGGACTTCC TCGAGAAGAG CGAGGCCATC 
CACTGGACGG CCTGGTGTGC CGATCCCGTC TGGCGGCCAG TCATGTTCAG CCGTCCGTTC 
GCTGACAACG CGGACGACTC GGTCGGCGAT CCCTACAACG GCACCGTCCC CGAGGCCTGC 
TCGGAGTTGC CCTGCGAGTG GGAACTGACG ACGGGCAGCG GCTACATGGG CGACGACGTC 
AAGAGCGCCC TTGAGCAGTA CCGCAACGAC GGGATCCCCG GCGAGGGGAC TGGCAATGGC 
GACGACGATG ACGACGACGG TGACACGCAG GCCCCATCGG CGCCATCGAA CGTCTCGGTC 
GCGTCGACGA GCGAGACCTC GGTCGAGGTC ACCTGGAGCG CGTCGACGGA TTCGGGCGGC 
TCCGGCCTCG ACAGCTACGT CGTCACCGTC GACGGCAGCG AAGACCAGAC GGTGCCGGCG 
GGAACCACGT CGGCGACCAT CGACGGGCTC TCTGCCGGGA CGACGTATCA GATCGCGGTT 
GCGGCGGTCG ACGGGGCGGG CAACGAGTCC GCCGCGACAA CCGTCGAAGC GACGACAGAC 
GAGACCGACG ACGGCGAGGA CGGCCAGGAC GATGGCGACG ACGAAGCGCC GGCAGACGCC 
CTCATCGTCA ACGACTACGA CGGTGATCCG GCGTGGTCGT CCAACCGGAA CGACCTCGGC 
CAGTGGTGTG GGGCCGGTTC CTTCGAGAAC GATGGTGGCG ACGTGCAGGA TGGCGCACTG 
ACGCTCGAAT ACGACAATGG CGGCTGGTTC GTCGAGCAGC TCGGCCAGGA CGTCTCGGAG 
TACTCGGAAG CCGTCCTCCG GGTCCGTGGG GCAAACGGCG GCGAGGAGGA CGAGTTCATC 
TTCGATATGG GTGGCGCGCG TGACATCCTG TCGAATCTGA CCGACGATTC GATCTCGACA 
TCGTTCTCGA ACGTCACGAT CGATCTCGAA TCGGCAGGCA TCGACCCGTC GGCTGGGGGC 
CTCTCAGTTC GGCTGAACTT CTGGCAAGGC GGCTCCAGCA CGCTCGAAAT CGAGGAGATC 
CGTCTGCAGT AA 

 

Protein sequence

MTDPDRPPTG DREASQSNTT TGGEGPSRRT FLKSSVLTGA LTFGVGAGAL GSASAAIPTP 
QLHRDGNLIK DPDGNTVTLR GVNIADPKRI NETAQARGMT ATQVIDMLTD ESNGWYPRMI 
RVPVQPVDIG EYEPGSGPPV PAFNESELES YLSNHLDEVV QRCADRGVYC IIDYHRHRDV 
QWAEGQDGPV NTELQDEVDM FWDTVAPRYA DQSHVLYEVY NEPTEPGMWE DPTTTQWVAD 
IWQLWLEMAQ PWVDTIRSHA DNLILMGSPS WSQSPEGALV EEFDGEDIAY TFHIYPGHNS 
SQNQNWEDAS NNGEGVAGVY EEAPLFVTEF GWEENGGQYI GGTDDFGTAF LDFLEKSEAI 
HWTAWCADPV WRPVMFSRPF ADNADDSVGD PYNGTVPEAC SELPCEWELT TGSGYMGDDV 
KSALEQYRND GIPGEGTGNG DDDDDDGDTQ APSAPSNVSV ASTSETSVEV TWSASTDSGG 
SGLDSYVVTV DGSEDQTVPA GTTSATIDGL SAGTTYQIAV AAVDGAGNES AATTVEATTD 
ETDDGEDGQD DGDDEAPADA LIVNDYDGDP AWSSNRNDLG QWCGAGSFEN DGGDVQDGAL 
TLEYDNGGWF VEQLGQDVSE YSEAVLRVRG ANGGEEDEFI FDMGGARDIL SNLTDDSIST 
SFSNVTIDLE SAGIDPSAGG LSVRLNFWQG GSSTLEIEEI RLQ