| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2380 |
|---|
| Symbol | |
|---|
| ID | 8384679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2422500 |
|---|
| End bp | 2423201 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644973453 |
|---|
| Product | protein of unknown function DUF159 |
|---|
| Protein accession | YP_003131279 |
|---|
| Protein GI | 257053446 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000423794 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGTC GATACGGGCT GTTCACGCCG CCCACGGAAC TCGAAACTCG CTTCGATGTC
ACTGTCCAGG CTGCCTTCGA GCCGACGTAC AACGCCGCGC CCGGAGAATC GCTCCCCGTC
ATCGCCGACG ACGAGCCGGG AACAATTCGA ACCGCCGAAT GGGGCCTCAT CCCGTCGTGG
GCCGACGACC CCGACGAGCA CCGCCACATC AACGCTCGTG CCGAGACGCT GTTCGAGCGG
TCGAGTTTCC GCGAGGCGGC CCAACGGCGG CGCTGTCTGG TCCTCGCCGA CGGCTTTTTC
GAATGGGGGT CGCCTGACGG CCAGCGCCGC CCCTACTTCT TCAGACGATG CGATGGCGAT
CCCTTCGCCA TGGCCGGGCT CTGGGAACGG TGGGAACCGC CCTCGACGCA GGTCAAACTG
GGTGCGTTCG GTGGCGATAC GGTCTCAACG GACGCTGCCC CGGTCGAAAC GTTCACTATC
GTCACGACGG CGGCGAACGC AACTGTCGAA CCGGTTCACG ATCGCATGCC GGTGGTGCTA
CCACCCGATC GGGAGCGCGA GTGGCTCTCG GCTGATCGGG AGACGGCAAC CGCGTTGCTG
GAGCCTGCGC CGCCGGACCA CCTGCGCGTC GATCCTGTTA CCCGGGCCGT CAACGATCCA
ACCAACGATC GGCCCGACCT GGTCACGCCG GTGGCGGAGT GA
|
|---|
| Protein sequence | MCGRYGLFTP PTELETRFDV TVQAAFEPTY NAAPGESLPV IADDEPGTIR TAEWGLIPSW
ADDPDEHRHI NARAETLFER SSFREAAQRR RCLVLADGFF EWGSPDGQRR PYFFRRCDGD
PFAMAGLWER WEPPSTQVKL GAFGGDTVST DAAPVETFTI VTTAANATVE PVHDRMPVVL
PPDREREWLS ADRETATALL EPAPPDHLRV DPVTRAVNDP TNDRPDLVTP VAE
|
|---|
| |