Gene Huta_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2380 
Symbol 
ID8384679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2422500 
End bp2423201 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID644973453 
Productprotein of unknown function DUF159 
Protein accessionYP_003131279 
Protein GI257053446 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000423794 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGGTC GATACGGGCT GTTCACGCCG CCCACGGAAC TCGAAACTCG CTTCGATGTC 
ACTGTCCAGG CTGCCTTCGA GCCGACGTAC AACGCCGCGC CCGGAGAATC GCTCCCCGTC
ATCGCCGACG ACGAGCCGGG AACAATTCGA ACCGCCGAAT GGGGCCTCAT CCCGTCGTGG
GCCGACGACC CCGACGAGCA CCGCCACATC AACGCTCGTG CCGAGACGCT GTTCGAGCGG
TCGAGTTTCC GCGAGGCGGC CCAACGGCGG CGCTGTCTGG TCCTCGCCGA CGGCTTTTTC
GAATGGGGGT CGCCTGACGG CCAGCGCCGC CCCTACTTCT TCAGACGATG CGATGGCGAT
CCCTTCGCCA TGGCCGGGCT CTGGGAACGG TGGGAACCGC CCTCGACGCA GGTCAAACTG
GGTGCGTTCG GTGGCGATAC GGTCTCAACG GACGCTGCCC CGGTCGAAAC GTTCACTATC
GTCACGACGG CGGCGAACGC AACTGTCGAA CCGGTTCACG ATCGCATGCC GGTGGTGCTA
CCACCCGATC GGGAGCGCGA GTGGCTCTCG GCTGATCGGG AGACGGCAAC CGCGTTGCTG
GAGCCTGCGC CGCCGGACCA CCTGCGCGTC GATCCTGTTA CCCGGGCCGT CAACGATCCA
ACCAACGATC GGCCCGACCT GGTCACGCCG GTGGCGGAGT GA
 
Protein sequence
MCGRYGLFTP PTELETRFDV TVQAAFEPTY NAAPGESLPV IADDEPGTIR TAEWGLIPSW 
ADDPDEHRHI NARAETLFER SSFREAAQRR RCLVLADGFF EWGSPDGQRR PYFFRRCDGD
PFAMAGLWER WEPPSTQVKL GAFGGDTVST DAAPVETFTI VTTAANATVE PVHDRMPVVL
PPDREREWLS ADRETATALL EPAPPDHLRV DPVTRAVNDP TNDRPDLVTP VAE