Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2377 |
Symbol | |
ID | 8384676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 2421152 |
End bp | 2421646 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644973450 |
Product | nucleic acid-binding protein contains PIN domain- like region |
Protein accession | YP_003131276 |
Protein GI | 257053443 |
COG category | [R] General function prediction only |
COG ID | [COG2402] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000258071 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGAGC CAGTTGAGAC GCCGGTCGGG ACGGTTACGC CGGAGCATTT CAGGCCCTCG GCAGTGCATC ATCAGGCCGT TCTCGGTCCG AAGTTCCTCT ATGCGTTGTT CAACCCGCGT GACGAGATGC ACGCCGTTTC CCGTGCGTTC ATGACGTTCA TCCGCGACGG AGAGCTGCCG TATCGGCGGC TGATACTCAA CGACCACATC GTGGACGAAG CCGCCACCCG ATTGAAGAAG CAGGCGTCGA TTCGGCACGC AGTGACGTTT CTGGAGACTA TCGAAGAGAG CACTCTCTAT CAACTCGAAC CGGTCCCCGG CGACGTATTC GAGGCTGGGA CAGGTCGCTT TCGAGAGTGG ACCGATCTCG ATGCGTCGTG TACGGACTTC GTCGTCGCAT CACACATGGC CGACCTGGAC ATCGAGTACC TCCTCACGTA CGACCAGCAT TACGAAGCCT TCGACATCAC GACGGTACCG TATCTCAGTC AGTGA
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Protein sequence | MAEPVETPVG TVTPEHFRPS AVHHQAVLGP KFLYALFNPR DEMHAVSRAF MTFIRDGELP YRRLILNDHI VDEAATRLKK QASIRHAVTF LETIEESTLY QLEPVPGDVF EAGTGRFREW TDLDASCTDF VVASHMADLD IEYLLTYDQH YEAFDITTVP YLSQ
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