| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2357 |
|---|
| Symbol | |
|---|
| ID | 8384656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 2403344 |
|---|
| End bp | 2404378 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644973430 |
|---|
| Product | Alpha/beta hydrolase fold-3 domain protein |
|---|
| Protein accession | YP_003131256 |
|---|
| Protein GI | 257053423 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00444827 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGTC CCCCGACCTG GACGCGGCGT GGCGTGCTGA CGGCACTGCT CGCCGCCGGT
GCCGGCTGTA CAACCGAGAC GGACGACTCG ACGACGAGTA CCCAGGAACC GTCGGACCCG
GAGACGCCGA CGGACGAGCC TTCCGAGCGT TCGACGACGT CAGCACCAAC GCCCACAGAA
ACCGCGACGA CGACCGAGGA GCCGACGGCG ACGGACGAAC CGACGACCGA AGAGCCGACG
ACAACCGCCG AATCGATGGA AGAGATCACC GACGTCGCGT TCAGAGAGAC GCCCCAGCGG
ACGCTTCGAC TCGACCTCTA TCTCCCATCG ACCGAGGAAT CCAGCCCGTT CGTCGTCTAC
GCCCACGGCG GCGGCTGGAT CGGCGGTGAC AAGGGCCACC GGCCGATGTT CGATCGACTT
GTCGAGGAAG GCTTCGCCGT CGCCGATATT CAGTACCGTC TGGCCCAGGA GAAGCAGTAT
CCGGCGGCGG TTCGGGACGT CGTCGCGGCC GTGAAGTGGG TCCGGGCCAA CGCCGGCGAG
TATGGAATCG ATAGCGAGCG CGGAGCGCTC GCCGGCTACT CCGCCGGGGC ACACCTGGCC
GCGCTGGTGG CGGTCGCGCC CGATCACGAG AACTTCCAGC CCGACGAGTT CCACCCGGAC
GTCCCGGTCG GTGTCGACGC ACTCGTCGGC TACAGCGGCC CCTACGACTT CACTGAATCC
GGGATCGGAG AGAACCCGCT CGTCGCGGCC TTTTTCGGCG CGGACGCCCC GACGGAGCGT
CTCGAGGAGG GGTCACCCGT CAGTCACGTT GAGGGCGACG ATCCGCCGGC ACTGTTGATC
CACGGCACCG ATGACAACGT CGTCCCGTAT CGGTCGACGA CGGCCCTGGC TGACGCCTAC
CGGAACGCCG GCGTGCCGGT CGACGTCCTC ACGGGGGATG GTGCCGGCCA CGGGATGATC
GACAACGACG AGTGGCGCGA GGAGACGCTA CCGAGCCAGG AGCAGTTCCT CGCCGACCAC
CTCTTGACGC AATAA
|
|---|
| Protein sequence | MTGPPTWTRR GVLTALLAAG AGCTTETDDS TTSTQEPSDP ETPTDEPSER STTSAPTPTE
TATTTEEPTA TDEPTTEEPT TTAESMEEIT DVAFRETPQR TLRLDLYLPS TEESSPFVVY
AHGGGWIGGD KGHRPMFDRL VEEGFAVADI QYRLAQEKQY PAAVRDVVAA VKWVRANAGE
YGIDSERGAL AGYSAGAHLA ALVAVAPDHE NFQPDEFHPD VPVGVDALVG YSGPYDFTES
GIGENPLVAA FFGADAPTER LEEGSPVSHV EGDDPPALLI HGTDDNVVPY RSTTALADAY
RNAGVPVDVL TGDGAGHGMI DNDEWREETL PSQEQFLADH LLTQ
|
|---|
| |