| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2350 |
|---|
| Symbol | |
|---|
| ID | 8384649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 2393139 |
|---|
| End bp | 2394056 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644973423 |
|---|
| Product | putative GAF sensor protein |
|---|
| Protein accession | YP_003131249 |
|---|
| Protein GI | 257053416 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2203] FOG: GAF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.175115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCACC GAATCCTCTG CGTGGACGGG GACAAAGACG CCAGCGAGGA CACCGCTGAA
ACCATCCGAT CCCAGCTGGC GGATCTCGAC CCTGTCGTCG AAACGGCGGG GACGCTGGCC
GACGCCGAGG CGTTACTCGG GACGGACACG GACGTGATCG TCACCGAATA CGACCTTTCC
GACGGGACGG GCTTCGATAT CGTCAGCGCG GCCGAAGACG TCTGTCCCGA TGCGGGGGTG
ATCCTCTATA CCGACACCGA TCCGGGAACG CTCGACACGA TCGAACTCCG TGGTGCGATC
ACCGAGTACG TCGGCAAGGA TTCGGTCTTC GGCGAGGAGC GGCTGGCCGA TCTGGTTCGC
ACAACGATCG AAACCAGAAG CCAGGGCTCC TATCCGATGC CCCAGACCGA AGCCGAGCGG
CTCGCCGCAC TCCAGTCCTT CGACCTCGAC GACGAGGAGT TGATCGAATC ACTCGATCGG
ATCACCGACC TGGCAGCCGC CCACTTCGAC GTCGAGCAGG CCTCGATCAA CCTCATCACC
GAATACAGTC AGGAATTTCT GGCCTGTTAC GGGGAAGCCG AAGACTGGAA GACAATGGAT
CGGGAAGACT CGATCTGTAC GTTCACGATC CTCGAGGAGT CCGGCGTCAT GGCCGTCGAG
GATGTGACCG AGGATCCACG GTTTCAGTCC CGTGCGGACT CACTCATCGA ATTGGGGATC
CGGGCGTACA TGGGGGCGAA TCTCATCACG TCCAACGGTC TCGTTATCGG GCCGCTGTGT
ATCTACGACG ACGAACCGCG GTCGTTCTCC CCGGCCGAGA AAGCCTATCT CAGAGACCTG
GCGGCTGTGG CGATGGACCT CATCGAGTAT CATACCCAAC TGCGTGCCGT GGGCGATATC
GAGGAGGCGG ACCAATGA
|
|---|
| Protein sequence | MTHRILCVDG DKDASEDTAE TIRSQLADLD PVVETAGTLA DAEALLGTDT DVIVTEYDLS
DGTGFDIVSA AEDVCPDAGV ILYTDTDPGT LDTIELRGAI TEYVGKDSVF GEERLADLVR
TTIETRSQGS YPMPQTEAER LAALQSFDLD DEELIESLDR ITDLAAAHFD VEQASINLIT
EYSQEFLACY GEAEDWKTMD REDSICTFTI LEESGVMAVE DVTEDPRFQS RADSLIELGI
RAYMGANLIT SNGLVIGPLC IYDDEPRSFS PAEKAYLRDL AAVAMDLIEY HTQLRAVGDI
EEADQ
|
|---|
| |