Gene Huta_2345 details

Gene Information

• Locus tag: Huta_2345
• ID: 8384644
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2387788
• End bp: 2388417
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644973418
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003131244
• Protein GI: 257053411
• COG category: [R] General function prediction only
• COG ID: [COG3413] Predicted DNA binding protein

Plasmid Coverage information

• Num covering plasmid clones: 87
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGAAC CGCCGGACTG GCGCAACCCG ATGCACACCT TCATTACGGA GACTGCGGGC 
TTCGAGCGGG CGGAGCTGTT GATCTGGAAC TTCTCGCGGA GCGAACTCGA CGTCCTGCTG 
TTCCGCGTCG TCGGCCCGAT CGATCCCTAT CGTGAGGCGA TCGATGCAGC GCGGTTCGTC 
ACCGACTACG ATCTCACGCC GATCGACGAT GACGCATTCT ACGCCTACGT CGAACACGAG 
ACCCGTGAGA TGGACCGACA GCTCCGGGAT TCCTTCGACG GCAAACACGT CGTCCTGGTT 
CCGCCGGTGA TCTACCACGC CGACGGCACG ACGCGACTCC GGACTGTGGG TCGATCCGAG 
GCCCTGGAAT CCGTGATCGA TGCCGTTCCC GACGCGATCG ACGTCACCGT CGAGTCCATC 
GGCGAGTATC GCGGCCCGGC CCGGGGGACC CTTGAGCTGA CGGACCGCCA GCGCGAGGTC 
GCCAGAACTG CCGTCGAGAT GGGATACTAC GACGTTCCAC GGGACGCGTC GGTCGCGGAC 
ATCGCCGATC GGCTCGATTG TGCAGCCAGT ACTATCTCGG ATCACATCCG AAAGGCCGAA 
CGTGCCGTGA TGGTCGGGCT GTTCGAGTGA 

 

Protein sequence

MQEPPDWRNP MHTFITETAG FERAELLIWN FSRSELDVLL FRVVGPIDPY REAIDAARFV 
TDYDLTPIDD DAFYAYVEHE TREMDRQLRD SFDGKHVVLV PPVIYHADGT TRLRTVGRSE 
ALESVIDAVP DAIDVTVESI GEYRGPARGT LELTDRQREV ARTAVEMGYY DVPRDASVAD 
IADRLDCAAS TISDHIRKAE RAVMVGLFE