Gene Huta_2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2318 
Symbol 
ID8384616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2357085 
End bp2359100 
Gene Length2016 bp 
Protein Length671 aa 
Translation table11 
GC content61% 
IMG OID644973391 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003131218 
Protein GI257053385 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.202041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTGTC TCCTTACAGA TCCAACGACG GTGCTTGCCG TCGGCGGATC CCCTGCGAAT 
CTCGAGGCTG TTCGATCAGC GCTTGCTGAT TCTGCTGCCG AGGACGTCAT CGAGGTCGAC
GATATCAACG TCGGGTCGAC CCTCGAAGCT CGTGACGATA TCGGGTGTGT ACTGGTTTTC
GATGCCGATG CAACGTTCGT CGACGTATAC GAGCATGTCA GAGCCGTCGA CGAGAACGTG
CCGGTCGTGG TGCAGACGGA ACCCGATGAA TCGACCGCCG TGGCGGTCAG CCAACGTTCG
GCTTGTCGGT TGGTGCCGAG CGATGCCGGT GACGCTGTCC TTCGGAAGAC TGTCGAGGAC
GCACTGTCGA CCTACGAGCG GCGGCGAAAC GAAGCGGCAG ATAGCAGTAT TCTCGAAACG
TTGCTCGCTG AAGGGAAGAT GTCGATGTTT GCCAAGGACG ACCGCGGTCG GTACGTCCGC
TTTGCTGACG TGCCCTACAC GGCCAACCCC GCGGAAGTCA GGGGCAAGAC TGATCCGGAG
ATATTCAACC AGCAGGAGAT CTCCGAGGAG GCACTCGCTA ACGATCTCCG TGTCGTCGAG
ACGGGCGAAC CGATCCGTGA CAATATCGAG CGCTTCAGCG GCGCGGGCGG AGACCACTGG
TCGGAGGCGA CGAAGATTCC CTGGCGTCGG AATGGGGAGG TCATCGGTGT GGTCGGGTAT
GCCAAAGACG TCTCCAAACG GATGCAGTAC AAAAAGCGAT TCGAGGAGGA GCGCCGTCGC
TTCGACAAGT TCGCGAGTTA CGTTTCACAC GACCTTCGGA CGCCGTTGCA GGTGATCGTC
GGTGCCCTCG AGCGCGCTCG TGACGGGGAC ACTGACGCCC TCGATCGGAT CGAGCGCGCG
ACTGACCGCG TCGGCGAGAT CATCGAGGAT CTGAGTTCCC TCTCGAAGGG AGATCAGGAC
GCCACTTCAT TTTCCGAGGA GGTTCTCGAC GCGCTCGATA TCGGCGTCTC GACGACTGAA
CTCCCGTCGC TGGTCGAGAA CGTCTGGCAA CTCGACAGCA CAGAGTCGGC GACGCTCGAA
ATCGATATGC CCGAGGAGAC CGAGATCGTC GCCGAAACGG AGACGGTTCG CCCACTGATC
GAGAACCTGC TGAAAAACGC CGTCGATCAC GCCGGCCCTG ACGTGACTGT CCGTGTCGGG
ACGATGGACC GTGGCTTTTT CGTGGCCGAC GACGGTCCCG GAATCCCGCC GGAGGAGCGC
GATCAGATCT TCGATGAAGG GTATACAACT GCTGAAGAGG GTAGTGGAAC CGGCCTCACG
ATCGTCAGTG AAACCGTCTC ACAGCAAGGG TGGGAAATGG ACGTGACTGA AAGTGAAGCC
GGCGGTGCTC GCTTCGAGAT CACCGAGTGT CCCGTCGTCG AACCGTCGAC CACTACGCCG
GGCGATCCGA TCTCCCTCTC GACAAACGAG GACATCGGTA CCGTCTCCGT TCCCGGGGAA
GCCAGCTACG ACCCGGATAC CGACGTCTGG ACGGTTGTCG GCGACGGCCG GGACATCTGG
CAGGATATCG ATGAGTTCCA CTTCGTCTAC GCGACGACGT CAGAGCCCGT TCGTATCCAG
GGACGTCTGA GCGAACTCGA GGGCGTCCAC GAGTACAGTA AGGCCGGGCT GATGGTCCGG
GACGGACTTG GCGACGACGA CGCCCTTGCA CTGATCGGTG CGACCCGGGA CTACGGCAGT
GAAGTGCTCT GGCGAACCCG GACTGGTGGC AATGCGGAGA GTACGCAGTA CGAAGAGCCC
TACGACGCGT TCCAGTGGTA CCAACTCGTC GTCGACGAGC GTGGCGTGAC GCTGTCGTTT
TCGACGGACG GCGAGGAGTG GCAACCGCTC GAACAGTTAC CGATCGAACT TCAGCCGCCA
TACCACGTTG GGCTTGCCGT CTGTAGCCAC ACAGACGATC TGACTGCCGA AGCCCGGTTC
GAGAACGTGA CCGTCAACGA ACTCGAGAGC GAATAA
 
Protein sequence
MSCLLTDPTT VLAVGGSPAN LEAVRSALAD SAAEDVIEVD DINVGSTLEA RDDIGCVLVF 
DADATFVDVY EHVRAVDENV PVVVQTEPDE STAVAVSQRS ACRLVPSDAG DAVLRKTVED
ALSTYERRRN EAADSSILET LLAEGKMSMF AKDDRGRYVR FADVPYTANP AEVRGKTDPE
IFNQQEISEE ALANDLRVVE TGEPIRDNIE RFSGAGGDHW SEATKIPWRR NGEVIGVVGY
AKDVSKRMQY KKRFEEERRR FDKFASYVSH DLRTPLQVIV GALERARDGD TDALDRIERA
TDRVGEIIED LSSLSKGDQD ATSFSEEVLD ALDIGVSTTE LPSLVENVWQ LDSTESATLE
IDMPEETEIV AETETVRPLI ENLLKNAVDH AGPDVTVRVG TMDRGFFVAD DGPGIPPEER
DQIFDEGYTT AEEGSGTGLT IVSETVSQQG WEMDVTESEA GGARFEITEC PVVEPSTTTP
GDPISLSTNE DIGTVSVPGE ASYDPDTDVW TVVGDGRDIW QDIDEFHFVY ATTSEPVRIQ
GRLSELEGVH EYSKAGLMVR DGLGDDDALA LIGATRDYGS EVLWRTRTGG NAESTQYEEP
YDAFQWYQLV VDERGVTLSF STDGEEWQPL EQLPIELQPP YHVGLAVCSH TDDLTAEARF
ENVTVNELES E