Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2318 |
Symbol | |
ID | 8384616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 2357085 |
End bp | 2359100 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644973391 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003131218 |
Protein GI | 257053385 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.202041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTGTC TCCTTACAGA TCCAACGACG GTGCTTGCCG TCGGCGGATC CCCTGCGAAT CTCGAGGCTG TTCGATCAGC GCTTGCTGAT TCTGCTGCCG AGGACGTCAT CGAGGTCGAC GATATCAACG TCGGGTCGAC CCTCGAAGCT CGTGACGATA TCGGGTGTGT ACTGGTTTTC GATGCCGATG CAACGTTCGT CGACGTATAC GAGCATGTCA GAGCCGTCGA CGAGAACGTG CCGGTCGTGG TGCAGACGGA ACCCGATGAA TCGACCGCCG TGGCGGTCAG CCAACGTTCG GCTTGTCGGT TGGTGCCGAG CGATGCCGGT GACGCTGTCC TTCGGAAGAC TGTCGAGGAC GCACTGTCGA CCTACGAGCG GCGGCGAAAC GAAGCGGCAG ATAGCAGTAT TCTCGAAACG TTGCTCGCTG AAGGGAAGAT GTCGATGTTT GCCAAGGACG ACCGCGGTCG GTACGTCCGC TTTGCTGACG TGCCCTACAC GGCCAACCCC GCGGAAGTCA GGGGCAAGAC TGATCCGGAG ATATTCAACC AGCAGGAGAT CTCCGAGGAG GCACTCGCTA ACGATCTCCG TGTCGTCGAG ACGGGCGAAC CGATCCGTGA CAATATCGAG CGCTTCAGCG GCGCGGGCGG AGACCACTGG TCGGAGGCGA CGAAGATTCC CTGGCGTCGG AATGGGGAGG TCATCGGTGT GGTCGGGTAT GCCAAAGACG TCTCCAAACG GATGCAGTAC AAAAAGCGAT TCGAGGAGGA GCGCCGTCGC TTCGACAAGT TCGCGAGTTA CGTTTCACAC GACCTTCGGA CGCCGTTGCA GGTGATCGTC GGTGCCCTCG AGCGCGCTCG TGACGGGGAC ACTGACGCCC TCGATCGGAT CGAGCGCGCG ACTGACCGCG TCGGCGAGAT CATCGAGGAT CTGAGTTCCC TCTCGAAGGG AGATCAGGAC GCCACTTCAT TTTCCGAGGA GGTTCTCGAC GCGCTCGATA TCGGCGTCTC GACGACTGAA CTCCCGTCGC TGGTCGAGAA CGTCTGGCAA CTCGACAGCA CAGAGTCGGC GACGCTCGAA ATCGATATGC CCGAGGAGAC CGAGATCGTC GCCGAAACGG AGACGGTTCG CCCACTGATC GAGAACCTGC TGAAAAACGC CGTCGATCAC GCCGGCCCTG ACGTGACTGT CCGTGTCGGG ACGATGGACC GTGGCTTTTT CGTGGCCGAC GACGGTCCCG GAATCCCGCC GGAGGAGCGC GATCAGATCT TCGATGAAGG GTATACAACT GCTGAAGAGG GTAGTGGAAC CGGCCTCACG ATCGTCAGTG AAACCGTCTC ACAGCAAGGG TGGGAAATGG ACGTGACTGA AAGTGAAGCC GGCGGTGCTC GCTTCGAGAT CACCGAGTGT CCCGTCGTCG AACCGTCGAC CACTACGCCG GGCGATCCGA TCTCCCTCTC GACAAACGAG GACATCGGTA CCGTCTCCGT TCCCGGGGAA GCCAGCTACG ACCCGGATAC CGACGTCTGG ACGGTTGTCG GCGACGGCCG GGACATCTGG CAGGATATCG ATGAGTTCCA CTTCGTCTAC GCGACGACGT CAGAGCCCGT TCGTATCCAG GGACGTCTGA GCGAACTCGA GGGCGTCCAC GAGTACAGTA AGGCCGGGCT GATGGTCCGG GACGGACTTG GCGACGACGA CGCCCTTGCA CTGATCGGTG CGACCCGGGA CTACGGCAGT GAAGTGCTCT GGCGAACCCG GACTGGTGGC AATGCGGAGA GTACGCAGTA CGAAGAGCCC TACGACGCGT TCCAGTGGTA CCAACTCGTC GTCGACGAGC GTGGCGTGAC GCTGTCGTTT TCGACGGACG GCGAGGAGTG GCAACCGCTC GAACAGTTAC CGATCGAACT TCAGCCGCCA TACCACGTTG GGCTTGCCGT CTGTAGCCAC ACAGACGATC TGACTGCCGA AGCCCGGTTC GAGAACGTGA CCGTCAACGA ACTCGAGAGC GAATAA
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Protein sequence | MSCLLTDPTT VLAVGGSPAN LEAVRSALAD SAAEDVIEVD DINVGSTLEA RDDIGCVLVF DADATFVDVY EHVRAVDENV PVVVQTEPDE STAVAVSQRS ACRLVPSDAG DAVLRKTVED ALSTYERRRN EAADSSILET LLAEGKMSMF AKDDRGRYVR FADVPYTANP AEVRGKTDPE IFNQQEISEE ALANDLRVVE TGEPIRDNIE RFSGAGGDHW SEATKIPWRR NGEVIGVVGY AKDVSKRMQY KKRFEEERRR FDKFASYVSH DLRTPLQVIV GALERARDGD TDALDRIERA TDRVGEIIED LSSLSKGDQD ATSFSEEVLD ALDIGVSTTE LPSLVENVWQ LDSTESATLE IDMPEETEIV AETETVRPLI ENLLKNAVDH AGPDVTVRVG TMDRGFFVAD DGPGIPPEER DQIFDEGYTT AEEGSGTGLT IVSETVSQQG WEMDVTESEA GGARFEITEC PVVEPSTTTP GDPISLSTNE DIGTVSVPGE ASYDPDTDVW TVVGDGRDIW QDIDEFHFVY ATTSEPVRIQ GRLSELEGVH EYSKAGLMVR DGLGDDDALA LIGATRDYGS EVLWRTRTGG NAESTQYEEP YDAFQWYQLV VDERGVTLSF STDGEEWQPL EQLPIELQPP YHVGLAVCSH TDDLTAEARF ENVTVNELES E
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