Gene Huta_2313 details

Gene Information

• Locus tag: Huta_2313
• Symbol: rpl30p
• ID: 8384611
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2352267
• End bp: 2352731
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644973386
• Product: 50S ribosomal protein L30P
• Protein accession: YP_003131213
• Protein GI: 257053380
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1841] Ribosomal protein L30/L7E
• TIGRFAM ID: [TIGR01309] 50S ribosomal protein L30P, archaeal

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.156993
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGCAC TCGTGCAACT TCGCGGCGAG GTCGACGTCA GCGGCGACGT CGTCGACACC 
CTGATGATGC TCAACCTCGG CCGCGTCAAC CACGCGACGC TCGTCCCCGA GACGGACGCC 
TACCGGGGCA TGATCACGAA GGTCCACGAC GTGGTCGCCC ACGGCGAACC GTCCGTGGAG 
ACGGTCGAAT TGCTCCTCGA AAGCCGGGCC GAGCCCGCCG AGGGCGGAGA AGACGTAGAC 
GACGATTGGG TCGGCTGGAA CACCAACTAC GACGATATCT CGGGTCTTGC CGAGGCGCTC 
GTAGACGAGG AGACGACGCT GCAGGACGCC GGTCTCTCGC CGACGCTACG TCTGCATCCG 
CCCCGGAAAG GGCACGACGG CATCAAACAC CCCGCCAAAG AGGGGGGCCA GCTCGGCGAT 
CACTCGACTG CGGAGATCGA CGCACTGCTG GAGGCGATGC GATAA 

 

Protein sequence

MEALVQLRGE VDVSGDVVDT LMMLNLGRVN HATLVPETDA YRGMITKVHD VVAHGEPSVE 
TVELLLESRA EPAEGGEDVD DDWVGWNTNY DDISGLAEAL VDEETTLQDA GLSPTLRLHP 
PRKGHDGIKH PAKEGGQLGD HSTAEIDALL EAMR