Gene Huta_2311 details

Gene Information

• Locus tag: Huta_2311
• Symbol: rpl18p
• ID: 8384609
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2351075
• End bp: 2351638
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644973384
• Product: 50S ribosomal protein L18P
• Protein accession: YP_003131211
• Protein GI: 257053378
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0256] Ribosomal protein L18

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.427446
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGACAG GACCACGATA CAAGGTGCCG ATGCGTCGGC GCCGCGAATC CCGGACGGAC 
TACCATCAGC GGTTGCGCCT GCTGAAATCC GGCAAGCCCC GCCTCGTGGC GCGGCTCTCG 
AACAGCCAGG CCAGGGCGCA GCTGGTGACG ACCGGGCCGA ACGGCGACGA GACAGTTGCA 
GCCGCCGAGT CGAACGACCT CGCCGAGTAC GGCTGGGAGG CACCGACGGG CAACCTGCCC 
GCCGCGTACC TCACCGGACT GCTCGCCGGG CGTCGTGCGA TCGAGGACGG CTTCGAAGAG 
GCCGTGCTGG ATATCGGACT CAACACGCCG ACGCCAGGAA GTAAAGTATT CGCGATCCAG 
GAGGGCGCGA TCGACGCGGG CCTGGAGATC CCCCACAACG ACGACGTGCT CGCCGACTGG 
GAACGGACCA GTGGCGAACA CATCGCCGAG TACGCCGAGG GCCTCGACGA GGACCTCTAC 
AGCGGGGATT TCGACGCGAC AGAACTGCCC GCACACTTCA CCGAGTTGCG AGAGCAGTTA 
CTCGAAGGTG ACATCGAACT ATGA 

 

Protein sequence

MATGPRYKVP MRRRRESRTD YHQRLRLLKS GKPRLVARLS NSQARAQLVT TGPNGDETVA 
AAESNDLAEY GWEAPTGNLP AAYLTGLLAG RRAIEDGFEE AVLDIGLNTP TPGSKVFAIQ 
EGAIDAGLEI PHNDDVLADW ERTSGEHIAE YAEGLDEDLY SGDFDATELP AHFTELREQL 
LEGDIEL