Gene Huta_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2260 
Symbol 
ID8384556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2307428 
End bp2308450 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content67% 
IMG OID644973331 
ProductGTP cyclohydrolase 
Protein accessionYP_003131160 
Protein GI257053327 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00294] conserved hypothetical protein TIGR00294 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGC AACTCCCGGA CGTGCAGGCG AACAGTCCGG AGGTCGCCGT CGGACTCAAC 
CGCGTCGGCG TCACCGGTGT CGAGAAACTC GTCGAGATCG ACCGCGAGGA CCGTCGCCCG
ATCGTCCTGA TGGCGACGTT CGACGTCTTC GTCGACCTCC CCACCTGGCG AAAGGGAGCG
GACATGAGTC GCAACATGGA GGTCATCGAC GAGACGCTCG AAGCCGCCGT CGACAACACC
GGCTACCGCG TCGAGGACGT CTGTGGTGAC GCCGCCGAGC GTCTTCTCGA CAAGCACGAC
TACACCGACC GCGCGGAGGT GCGCATGGAG GCCGAGTACG TCACCCGCGA GCGCACGCCC
GAAAGCGACC GCCCGACTCA GAGCACCGCC GACATCATCG CCTCCGCGAC CGCGACCGAC
GAGGGGACTC GGGAGGAACT CGGCGCGCGT GTCACCGGCA TGACGGTCTG TCCCTGTTCA
CAGGGAATGA GTGAGTCACG CGCCCGCCAG ACGCTGAACG ACCTCGACGT CGATCGGGAG
ACCATCGACA CCTTCCTCGA TGAAGTCCCC CAGGCCGGAC ACTCCCAGCG CGGGCACGCC
ACGCTCACCA TCGAGAGCGA TGGCTCGCCG GACGTCGACC TCCGGGACGT CATCGCGGTC
GCCCGCGATG CGATGAGCGC CCACATCTAC AACCTCGCGA AACGTCCGGA CGAGGATCAT
ATGACCTACG AGGCTCACGC CGACGCCAAG TTCGTCGAGG ACTGCGTCCG GTCGCTCGCG
GAGGGGGTTG TCGAGACGTT CCCCGATCTC CCCGAGAACG CTGTCATTCG AATGGAGCAG
TCGAACGACG AGTCGATCCA CCAGCACAAC GCCCACGCCG AGCGCGTGGC TCGATTCGGC
GATCTCACTG ACGAGGTCAA CGGCGACGCC GAGGGTGGCA ACCCCGAACC CGCCGACAGC
GGCGTGGCCG GGACGGAAAC CGACGCTGTC GACCGGCGGA CGAACGGCTC CGGCGACCGA
TAG
 
Protein sequence
MSKQLPDVQA NSPEVAVGLN RVGVTGVEKL VEIDREDRRP IVLMATFDVF VDLPTWRKGA 
DMSRNMEVID ETLEAAVDNT GYRVEDVCGD AAERLLDKHD YTDRAEVRME AEYVTRERTP
ESDRPTQSTA DIIASATATD EGTREELGAR VTGMTVCPCS QGMSESRARQ TLNDLDVDRE
TIDTFLDEVP QAGHSQRGHA TLTIESDGSP DVDLRDVIAV ARDAMSAHIY NLAKRPDEDH
MTYEAHADAK FVEDCVRSLA EGVVETFPDL PENAVIRMEQ SNDESIHQHN AHAERVARFG
DLTDEVNGDA EGGNPEPADS GVAGTETDAV DRRTNGSGDR