| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2247 |
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| Symbol | |
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| ID | 8384542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2295477 |
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| End bp | 2296937 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644973317 |
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| Product | replication factor A |
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| Protein accession | YP_003131147 |
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| Protein GI | 257053314 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.751833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGCGA TAGAGGACGT ATACGCGGAT CTCGACGCCG ATGTCTCCGA GGACGACTTC
AGGGAAGCCG TCGAGGAGAA GGTCGAACAG ATGGGGGGAC TGGCCGACGA GGAAACAGCG
GCGATGCTGA TCGCCCACGA ACTCACCGAG AACGAGGCCC AGACGGTCGC GGACGTCCAG
GCCGGCATGG AGGAGGTCCG GTTTCTGGCG AAGGTGCTTT CGATCGGCGA GTTGCGGACC
TTCGAGCGTG ATGGCGACGA CGAGGACGGC CGCGTGATCA ACGTCGAGGC GGCCGACGAG
ACCGACAGCC TCCGACTGAC GTTCTGGGAT GGGGAAGCTG TCGCCGTCGA CGAGGGGGAA
GTCGAAGTCG GCGACGTCCT CCGGGTCAAA GGTCGGCCAC AGGAGGGCTA CAACGGTCTC
GAGGTCAGCG TCGATCAGGC CGAACAGGAT CTCGACGCGA CGATCGACGT CGAACCCGGT
GACGGCGAGA CCATCGACGC GCTCACCATG GGCCAGTCGA ACGTCACCGT CGAGGGCGTC
GTCCTCGACA CCGAACCGGT GCGGACGTTC GAGCGCGACG ACGGGTCGGA GGGCCGGGTC
GCGAATCTCT CGATCGGCGA CGAGACCGGC CGCGTCCGGG TGACGCTGTG GGACGACCGC
GCCGACCGGG TCGAGGAGAT CGACGCCGGT ACGACGGTCG AAGTCGTCGA CGGCTACGTT
CGGGAACGCG ACGGCGATCT GGAGGTCCAC GTCGGCGAGG AGGGGGCGAT CGACGAGCTT
GACGATGCCG ACGTCGAATA CGCGCCGGAG ACGACGCCGA TCGATGACGT GGAACTGGAC
GAGACGGTCG ACATCGGCGG CGTCGTCCGC TCGACCGATC CGACGCGGAC GTTCGACCGC
GACGACGGCT CGGAGGGGCA AGTCAAGAAC ATCCGGATCC AGGACGACAC CGACGACATC
CGGGTGGCGC TGTGGGGCGA GAAAGCCGAC CGCGACCTCG CGCCGGGTGA CGAGGTCGTC
TGTGCCGACG TCGAGATTCA GGACGGCTGG CAGGACGATC TCGAGGCCTC CGCGGGCTGG
GGATCGACGG TCGTCGTCCT CGAGGACGGT GCGTCGATGG CGACGACCCC CGACGCGGAC
GATGCAGGCA CTGCGGGCGA GAACAATGTC CAGGACGCGG GCGCGTCGAC CGGGCTCTCG
GCGTTCGCAG ATGACGGCGA GGGCGGAGAG ACAGCGAGCG ACGGCACGGG CGGGAGTACT
GCGGGTGCGG AAGACGGGAC GGCGGACGGC GAGGAGGTCG AGTTCACGGG CACCGTCGTC
CAGACGGGCG ATCCGGTGAT CGTCGACGAC GGCGAACAGA CCGTCACTGT CGATACGACC
GAGTCGGTCC GTCTCGGGGA GGAAGTCACG GTCAGGGGGC GGCGACGCGG CGACGAGATC
GAGGCAGAGG AACTGTTTTG A
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| Protein sequence | MGAIEDVYAD LDADVSEDDF REAVEEKVEQ MGGLADEETA AMLIAHELTE NEAQTVADVQ
AGMEEVRFLA KVLSIGELRT FERDGDDEDG RVINVEAADE TDSLRLTFWD GEAVAVDEGE
VEVGDVLRVK GRPQEGYNGL EVSVDQAEQD LDATIDVEPG DGETIDALTM GQSNVTVEGV
VLDTEPVRTF ERDDGSEGRV ANLSIGDETG RVRVTLWDDR ADRVEEIDAG TTVEVVDGYV
RERDGDLEVH VGEEGAIDEL DDADVEYAPE TTPIDDVELD ETVDIGGVVR STDPTRTFDR
DDGSEGQVKN IRIQDDTDDI RVALWGEKAD RDLAPGDEVV CADVEIQDGW QDDLEASAGW
GSTVVVLEDG ASMATTPDAD DAGTAGENNV QDAGASTGLS AFADDGEGGE TASDGTGGST
AGAEDGTADG EEVEFTGTVV QTGDPVIVDD GEQTVTVDTT ESVRLGEEVT VRGRRRGDEI
EAEELF
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