Gene Huta_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2245 
SymbolglyA 
ID8384539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2292509 
End bp2293753 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content68% 
IMG OID644973314 
Productserine hydroxymethyltransferase 
Protein accessionYP_003131145 
Protein GI257053312 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACGG ACCTGACTCC CGTTGACGAT GAGTTGACCG CGGCGCTGGC GGGCGAGTGC 
GACCGCCAGC GAGAAACGCT CTCGCTGATC GCCAGCGAGA ATTACGCGAG CGACGCCGTC
CTGGCCGCCC AGGGGTCGGT GCTGACCAAC AAGTACGCCG AAGGCTCGCC CGGCGACCGC
TACTACGCGG GCTGTGCGTA CGCCGACGAG GTGGAGCAAC TGGCGATCGA CCGCGCCAGA
GCCCTTTTCG ATGCCGAACA CGCAAACGTC CAGCCCCACT CGGGTACCAG CGCGAATCTG
GCAGCCTACC AGGCACTCCT CGAACCCGGC GATACGATCC TCTCGCTTTC GCTCTCTCAC
GGCGGCCACC TCAGCCACGG CCAGCCCTAC ACCATGGTGG ATGACGTCTA CGACGTCGCC
CACTACGGCG TCGACGTGGA AACGGGCCGC CTCGATCACG AGCGCGTCCG CGAGCGTGCC
GAGGCCGTCG ATCCGGACCT GCTGGTCTCG GGCTATTCGG CGTACCCCCG ACAGGTCGAC
TTCGAGGGCA TGCAAGCCAT CGCCGAGGCG GTCGACGCCG TCCACGTCGC CGACATCGCA
CACCTCACCG GCCTCGTCGC GGCGGGCGAA CACCCCTCCC CAGTCGGCGT CGCCGACGTG
GTCACCGGTT CGACCCACAA GACTATCCGG GCCGGCCGCG GCGGGATGAT CCTCTGTGGC
GAGGCGTACG CTGACGTGAT CGATCGGGCC GTCATGCCCG GCACGCAAGG CGGCCCGCTG
ATGCACAACA TCGCCGGCAA AGCAGCCGGG TTCGGCGAGG CACTCGAACC CGAATTCGAT
GCCGACGCCG CCCAAACCAT CGAGAACGCT CGTGCCCTCG CTGCCCGCCT CGCTGACCGC
GGGTTCGACC TCGTCTCGGG CGGTACCGAC GTCCACTTCG CCTTGGTGGA CTTCCGGGAG
ACCCACCCGG AGCTGACCGG TGCGGTGGCC GAGACCGCGC TGGAGGACGT CGGTATCGTC
CTGAACAAGT CGACAGTTCC CGGCGAGGAG CGATCCTCGA CAGTCACCAG TGGCATCCGG
ATCGGTACGC CGGCGATCAC GACACGCGGG TTCGACGCCG CGGCGACCCG CCGACTCGCG
GACGCCATCG CGGACGTCTG TGACGCGCCC GATGACGACG GCGTCCGCGA GCAGGCACGC
GAAACGGTGG CCGATCTCGC CGAAGCCCAT CCGATCTATG CCTGA
 
Protein sequence
MVTDLTPVDD ELTAALAGEC DRQRETLSLI ASENYASDAV LAAQGSVLTN KYAEGSPGDR 
YYAGCAYADE VEQLAIDRAR ALFDAEHANV QPHSGTSANL AAYQALLEPG DTILSLSLSH
GGHLSHGQPY TMVDDVYDVA HYGVDVETGR LDHERVRERA EAVDPDLLVS GYSAYPRQVD
FEGMQAIAEA VDAVHVADIA HLTGLVAAGE HPSPVGVADV VTGSTHKTIR AGRGGMILCG
EAYADVIDRA VMPGTQGGPL MHNIAGKAAG FGEALEPEFD ADAAQTIENA RALAARLADR
GFDLVSGGTD VHFALVDFRE THPELTGAVA ETALEDVGIV LNKSTVPGEE RSSTVTSGIR
IGTPAITTRG FDAAATRRLA DAIADVCDAP DDDGVREQAR ETVADLAEAH PIYA