| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2220 |
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| Symbol | |
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| ID | 8384514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 2269598 |
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| End bp | 2271481 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644973289 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_003131120 |
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| Protein GI | 257053287 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAACGA ATCGACGGAC ACTGCTCGCA TCGACACCCG GTCTGCTCGT CGCCGGCGCA
CTCGCCCTGG CGGTCGCGCT GGTGGGACCA GGACTCGAAA CGCCCGCCAT GCTGGCGCTC
GGGGCGATTT CCCTACCGTT CGTCGGCGCG GCACTGTTGC CGTACGTCGC CGTCGCCGGT
GATCGAATCC GGAACGCGGT CGCCGTGGGC GTCGGTGTCG TGACGGCTAT CTTGACGCTA
TCGCTGATTC CGCGAGCGCT ATCGGCGGAA ACGCCGGCAG CCGTCCACTA CGACCTGGGG
TGGGTGCCCG CCATCGACGT CTCCTTTGGG CTGTATCTGG ACGTCCTCGG CGTGATGATG
GCGACCATCG CGGGTGTCGT CGGGGCGCTC GCGCTGGTCT TCTCGACGCG CTTCATGGAA
CGCGAGGGGG GACTCACCCG CTACTACGCG CTGACCCTGC TGTTCGTCGG CGGGATGATC
GGCTTCGCGC TGACCGACAG CCTCGTCGCG CTGTACGTCT TCTGGGAGGT TCTGGGGCTG
TGTTCGTTTG GCCTGATCTC CTTCTGGCTC GAAGACGACG CCTCCTTCGC GGCGGGCGTG
AAGGCGTTCG TTACGACCCG TTTCGGCGAC ATCGGCCTGC TGGCCGGGAT CGCCACCCTG
TACGTCGGCG GCGGGACGTT CTCGATCCGC GGGCTGATCG ACCAGGCGGC CGCGGGCGCG
CTGCCCGAGT GGACGCTCGC GGCCGCTGGC GGGCTGTTCA TCGTCGCGGC CGTCGGGAAG
TCCGCGCAGT TCCCCTTACA CGTCTGGCTG CCGGACGCGA TGGAGGCCCC GACGACCAGC
ACGGCGCTGA TCCACGCCGC CTGTATGGTC AACGCCGGCC TCTACCTCCT GCTCCGGACC
CGACCCATCT TCGACGGAGT GGCGTGGTGG ACGACCGCCG TGCTCGCCAT CGGGACGATT
ACAGCCTTCC TCGCAGCCGT GCTCGCGACC GTCGAGAACG ACTTCAAGCG GGCGCTGGCG
TACTGTACGA TCAGCCAGCT CGGGTACGTC ACGGCGGCGA TCGGACTGGC CGGCGGGGTC
CTGCCGGCGA CCGCCCACGT CCTGAGTCAC TCGATCTTCA AGGCGCTACT CTTTCTCGCT
GCGGGGTCGG TCATCTTCGC GCTGGGCGGC ACCGTCCACA AACACGTCGA CATGTACGAG
TTTCGCGGCG TGGGGAACCG CCGGCAGATG CCGATAACCA ACGTCGCCTT CCTGGTGGGG
ATTCTCGGCT TGATCGGCGT ACCCGGGTTC AACGGCTTCT GGAGCAAGGA ATACATCTTC
GCTACGGCGA TGGACGGGAG TCCGATCGAG ATGGCGGCCT TCGTCGTGCT CGCGATCACG
GCCGTGCTGA CGGTCGTCTA CTCGTTGCGG ATCTACTATC TGATGTTCCT CGGCGAGCCG
AGCGAGTCCG TCACCGAATC GCCACTGGCG ATGACTGGCC CGCTTTCGAT CCTGGCTGGC
CTGACGCTCA CCTCGTGGCT CGCAATCGGC CCGCTCTCGG AGGCTCTGCA GACTTACTTC
CCCGGCGCTG AGGTTCACAG CTATACGATC ATGGAATTCG TCGAGCACAC GCTCACCGTC
CAGACACTGG CGTTGACTGC CGGGATCCTC GGACTCGGCT ATCTCGGGTT CCGCTTCCGG
AAACCGATCA ACGACGCCGC CCCCGAAAGC CTGCTGTCAG TGCTCGCACT GGGCTACGGC
TTCGACGCCG TCTACGAGCG ATGCGTCGGG GCCTACCGCT GGTGGTGTGC CCGGACGCGG
GTCATCCAGA CTGGCGACCT CAACTACAAC GTTGTCGGCA TCGTGGTGGC GCTGGTGATC
GGCGGGATCG TGCTGGTGAT CTGA
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| Protein sequence | MVTNRRTLLA STPGLLVAGA LALAVALVGP GLETPAMLAL GAISLPFVGA ALLPYVAVAG
DRIRNAVAVG VGVVTAILTL SLIPRALSAE TPAAVHYDLG WVPAIDVSFG LYLDVLGVMM
ATIAGVVGAL ALVFSTRFME REGGLTRYYA LTLLFVGGMI GFALTDSLVA LYVFWEVLGL
CSFGLISFWL EDDASFAAGV KAFVTTRFGD IGLLAGIATL YVGGGTFSIR GLIDQAAAGA
LPEWTLAAAG GLFIVAAVGK SAQFPLHVWL PDAMEAPTTS TALIHAACMV NAGLYLLLRT
RPIFDGVAWW TTAVLAIGTI TAFLAAVLAT VENDFKRALA YCTISQLGYV TAAIGLAGGV
LPATAHVLSH SIFKALLFLA AGSVIFALGG TVHKHVDMYE FRGVGNRRQM PITNVAFLVG
ILGLIGVPGF NGFWSKEYIF ATAMDGSPIE MAAFVVLAIT AVLTVVYSLR IYYLMFLGEP
SESVTESPLA MTGPLSILAG LTLTSWLAIG PLSEALQTYF PGAEVHSYTI MEFVEHTLTV
QTLALTAGIL GLGYLGFRFR KPINDAAPES LLSVLALGYG FDAVYERCVG AYRWWCARTR
VIQTGDLNYN VVGIVVALVI GGIVLVI
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