| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2209 |
|---|
| Symbol | |
|---|
| ID | 8384503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 2260095 |
|---|
| End bp | 2261330 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644973278 |
|---|
| Product | translation initiation factor IF-2 subunit gamma |
|---|
| Protein accession | YP_003131109 |
|---|
| Protein GI | 257053276 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG5257] Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) |
|---|
| TIGRFAM ID | [TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.211822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGAA CACACGGACA CCCGGAGGTG AACATCGGAC TCGTCGGGCA CGTCGACCAC
GGCAAGACGA CGCTCGTCGA AGCTCTCAGC GGGGAGTGGA CGGATCAGCA CTCTGAGGAG
ATGAAACGCG GAATCTCGAT CCGACTGGGG TACGCCGACG CGACGTTCCG GCGCTGTCCG
GAGGGCGAGG ACGCGGCGGG ATACACCGTC GCCGAGGAGT GTCCCGAACA CGACGTCGAG
ACTGACGTTT TGCGGACCGT CTCGTTCGTC GACGCGCCCG GCCACGAGAC GCTGATGGCG
ACGATGCTCG CCGGCGCGGC TATCATGGAC GGGGCCGTCC TGGTCATCTC GGCGACCGAG
GACGTTCCGC AGGCACAGAC CGAGGAACAC CTGATGGCGC TTGACATCAT CGGGATCGAC
AACATCGTCG TCGCCCAGAA CAAGGTCGAT CTGGTCGACG CCGACCAAGC GCGACGGAAC
TACGAGCAGA TTCAGGACTT CATCGAAGGC ACCGTCGCCG AGGACGCGCC GATCGTCCCG
ATCAGTGCGG GCCAGAACGT CAACATGGAC CTGCTCATCG AGGCCGTCGA GGAGGAGATC
CCGACGGAGG ACCGCGACCT CGACGCCGAC GCCGAGATGC TCGTCGCCCG GAGTTTCGAC
ATCAATCGCC CGGGGACGAC CTGGGACTCG CTGTCGGGCG GCGTGCTGGG CGGGAGTCTC
GCCCAGGGCA GCCTCGAAGC CGACGACGAG ATCGAACTCC GACCCGGCCG CGAAGTCGAG
GAAGGCGGCC AGACGGAGTG GCGACCGGTC ACGACGACGG TCCGGTCGCT GCAGGCCGGC
GGCGAGGGCG TCGACGAGGT GACGCCCGGC GGGCTATTGG GCGTCGGGAC GGGACTCGAT
CCCTCGCTGA CGAAGGGTGA CGCGCTGGCG GGCCAGATCG CCGGCCCGCC CGGCACGCTC
CCCCCAGTCC AGGAGGAGTT CACGATGGAC ATCCAGTTGC TCGACCGGAT CGTCGCCGAG
GACACCGACG AGGTCGAGGA GATCTCGACG GGCGAGCCGC TCATGCTCAC GATCGGGACG
GCGACGACCG TCGGGTCGGT CACGAGCGCC CGCGACGGCG AGGCCGAAGT GGCGCTGAAA
CGGCCGGTGT GTGCCCGCGA AGGGGCGAAG ATCGCGATCA ATCGCCGGAT CGGCGCACGC
TGGCGGCTGA TCGGCGTCGG GACGCTCCGT GAATGA
|
|---|
| Protein sequence | MTGTHGHPEV NIGLVGHVDH GKTTLVEALS GEWTDQHSEE MKRGISIRLG YADATFRRCP
EGEDAAGYTV AEECPEHDVE TDVLRTVSFV DAPGHETLMA TMLAGAAIMD GAVLVISATE
DVPQAQTEEH LMALDIIGID NIVVAQNKVD LVDADQARRN YEQIQDFIEG TVAEDAPIVP
ISAGQNVNMD LLIEAVEEEI PTEDRDLDAD AEMLVARSFD INRPGTTWDS LSGGVLGGSL
AQGSLEADDE IELRPGREVE EGGQTEWRPV TTTVRSLQAG GEGVDEVTPG GLLGVGTGLD
PSLTKGDALA GQIAGPPGTL PPVQEEFTMD IQLLDRIVAE DTDEVEEIST GEPLMLTIGT
ATTVGSVTSA RDGEAEVALK RPVCAREGAK IAINRRIGAR WRLIGVGTLR E
|
|---|
| |