Gene Huta_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2188 
Symbol 
ID8384482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2239826 
End bp2240875 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content66% 
IMG OID644973257 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003131088 
Protein GI257053255 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.228893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAT TTGTCATGCG CGACATCGGC GAGACGGCCA TCATCGAAAA AGAGCGCCCC 
GAACCCGGTC CCCAGGACGC GATCTTGAAG CCCACGGAGG GGCTGATCTG CACCTCCGAC
TGTCACACCG TCCACGGCGC GATCGGCGAG CGTGAGGACC TCACACTCGG TCACGAAGTC
GTCGGCGTCG TCGACGAGGT CGGCAGCGCA GTCGAGCACT TCGAGGCGGG CGACCGTGTC
GCCGTCGGCG CGATCACGCC CGACTGGAAC TCCCTGGCGG CCCAGGACGG CCACCCCTCC
CAGTCGAATC AAGCCCTCGG CGGGTGGAAG TTCGCCAACG TCAAGGACGG CACCTTCGCC
GAGTATGTCC ACATCAACGA CGCCGACGGC AACCTCGCGA AGATCCCCGA GGGCGTCAGC
GATCACGAGG CCGCCTACGT CGCGGACATG CTTTCGACCG GCTTCGCCGG TGCCGAGCGC
GGCGACATCC CGATGGGCGG GACCGTCGCC GTCTTCGCGC AGGGTCCCGT CGGCCTGATG
GCGACGAAAG GGGCCGAGCT ACAAGGAGCC GGCCGGATCA TCGCCGTCGA GACCGTCCCC
GAACGCAAGG AACTCGCCCG CGAGTACGGC GCGACCGACG TTGTCGACTT CGGCGAGGTC
GATCCCGCCG AGGAGATCAT GGAGCTGACC GACGGCGAGG GCGTCGACGT CGCCATCGAG
GCACTGGGGG CTGACGAGAC CTTCCAGGAC TGCATCAAAG TCACCAAGCC CGGCGGCACG
GTCTCGAACG TCGGCTACCA CGGCGACGGC GAGTTCCGGC ACATCCCGCG CGCCGAGTGG
GGCGTCGGCA TGAGCGAGAT CGACATCGTC AACGACCTCT GTCCCGGCGG CCGCCTGCGC
ATTCAGCGCC TGCTCCGGTT GCTCGATCAG GGCAAGGTCG ACCCGACGAA GATGACCACC
CACGAGTTCG AGTTCGACGA GATTCAGGAG GCCTTCGAGA TGATGGAAAC GAAGGAAGAC
GGGATGATCA AGCCGCTGAT CCACTTCTAG
 
Protein sequence
MKAFVMRDIG ETAIIEKERP EPGPQDAILK PTEGLICTSD CHTVHGAIGE REDLTLGHEV 
VGVVDEVGSA VEHFEAGDRV AVGAITPDWN SLAAQDGHPS QSNQALGGWK FANVKDGTFA
EYVHINDADG NLAKIPEGVS DHEAAYVADM LSTGFAGAER GDIPMGGTVA VFAQGPVGLM
ATKGAELQGA GRIIAVETVP ERKELAREYG ATDVVDFGEV DPAEEIMELT DGEGVDVAIE
ALGADETFQD CIKVTKPGGT VSNVGYHGDG EFRHIPRAEW GVGMSEIDIV NDLCPGGRLR
IQRLLRLLDQ GKVDPTKMTT HEFEFDEIQE AFEMMETKED GMIKPLIHF