| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2147 |
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| Symbol | |
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| ID | 8384441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2192235 |
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| End bp | 2196905 |
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| Gene Length | 4671 bp |
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| Protein Length | 1556 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644973216 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003131047 |
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| Protein GI | 257053214 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.927191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG ATGATACATT TCTCTCTGAT GACTTTGAGG AGTATGCTAT TGGTTCGTTC
CCTGGCCGAT GGCAACAGAG TGGAAACAGC GATCAAAAAA TCGTTGATGA ACCCGTCACA
AGCGGCGACA AAGCGCTTCA GCTTGTAGGT AGTTACGGCA GTTGTTGGCA GGCATTAGCG
CACCGGGAAC TTGGTAGCTC TTTGCCTAAG GACGAGTCAG TCATCGTCCG CGGAGAGATC
GATCCGACTG GTGAGGGAGG AGGCGGCTGT CATGGCACAA AGAATGGAAG CATTGACATA
CGAGAGAATC CATCGGCTTG GCCAAATGTC GGATTCAAAA GAAAGCTGAT TCAATTCGAT
GCAGAGGGGT CCGTTCGAGG CGGCGGTATT GATCTCGGAT CATGTGAGAT TGGTGTGTAT
AATAGTTTCA AAATTGAATA CTACTGGGAT TCAAACGGAG AAGAAGTGAA TCTTCAGTAC
CAAATCAATG GCGAATTCAG AGGGGAGACG ACTGTTGATG TCCAGACCAA TGATAGTGGG
GATGTTGTTG AATCCAAGCT TCAATACCTC ACTGTAGTTA GTGGTGACTA TAAAATACAT
GTGGACCGCC TTTCAATCGT TTCTGGCTCA GATATTATAA CACGTCCAGA TCTCAATTCA
GAAATTTCCG TTTCGACCGC TACTACGTCT CCTGGCAACC AGATTACCTT TGATGCGAGT
AAGTCGACGG GCCAAATTGA TACGTATAAA TGGGAGTTCA GCGATGATAC TTCAGCCACA
GGATTAACCG TCACCCGTAG CTTCGATACT ACGGGAATAT ATTCTATCAC TTTGACTACC
GTAGATGGTG ATGAGACGGA TACGACGACA TCAGAGGTTG CCGTTGTCAG GGAAACGGAA
CTCAATTTCT CGGCCCAACC AGCACAGCCG GTAACCGGAC AATCCGTCAC ATTCGAAGGA
ACCGGAGGCA ATTCATACAC TTGGGATTTC GGTGACGGGA GAGGGGCAAC TGGTCAGCAA
GTCACCCACA CCTATGACGA GTCTGGCGAC TATCGCGTGA CACTTGCGAC AGAGCAGGAT
ACAGTCACTC GTACTATCTC GGTGAATTCA GCGAACATAG AGATAGCCAA TCTCGATCGA
GATATCGGCG GAACATTGCT TCCGAAACTT GGTATCGATG AGGGTGTCGA AGCGACCATT
AACACGGCTG ATGGACAGGA TATCGATCGT GTGGAATTCT ATTTTGCTGG TCAAAAAGCC
ATCTCCAAGA GTCCGCCATA CGATGCGTCC CTCACGATCG ACGACATCGA ACCACCTGCC
ACTCCGCTCA CGGTCCGTGC GGTCACGACT GATGGAATGC AACAAGACTT TCAACAGGAC
ATTCCTATTC AGCGACTCCC TGACTGGCTT GAATTCTTGC TGAAGTCTAC GGACACACTC
GGCGTTGCAC TGACCGACGA AGAAATTGAG ATCACATATA CTCCCCTATC GAATCTCGCC
CCGGGGATTG ACATTCCAAA TGATCTTCTT GGAGGAGATG AATCTCCCCG CGAGAACGGT
GACGGCGATT ATGATTTCGG CGTCGCGATG GGCGGTATCT ACGATCCCCG GACCAACGAG
GCCGAACTGA CTGCCGCGGG GAACATCACT GCCGAAGTGA TGGCACTCGC ATTCGAAATC
AAGGTCGCAT TGATTGGGGA AATCGAAGCA ACGACGCTTG AACTGCAGAG TGCGCAAGCA
GATATTGACA GCCTCCTATC ATTTGATGTC GCACCACCCA CAATACCCGT TCCAGTCAGC
ATTCCGATTC CCGGGACTGA CAGTGCTATC GGTATCGTGC CAACAATCCT CATTTCCGCC
GACGGAACGT TCGATTTCAA TGCAGACCTT TCGTTCGATA CTGGCACAGT GGAACCAGGT
GTCGAACTTC AAGTGTCGAT CGGTATCGCG CTTGAGCTCC CTGCCCTTCC TGACGGGGAA
CTCAAAGGCG TTCCGAGTGG TGGAATTGAT GGTCAATTCG ACGTTGGCAC TGACGACTGG
AACATTCAGG CCACATTTTT CCTCGCGGGA AAAGTCGTCC TTGATCCACC GTTCCTTCCC
GGAATCACAC TGGAGCAAGA TCCGATCTGG GATCAGCCAC TCACAGGGAG TACTACAGAA
CAAGTAACAG CGACCACAGT GTCTCGACCA CGTGTCTGTC ACAAGTCTGC GGGAGGCCCG
CAACCGCTCC CAGAGATCGA TAGTGTGGAC ACTGTTTCCG TTGATACTGA CACAATTTCA
CCGCGGGAGT CGTTCCGTCT CACTGACCGG CCTTACGAGG ACATCGAACC GGTACTCGCA
AGCCCGGCAG AGAATACACA AGTCGTGATC TGGGGGCAAC AGGCCGAGAA CAAACCAGCT
GATGCAGGTC ACGATCTTGT CGGCCGGTGG TACGAGAACG GTTCCTGGAG CAAGACGTTT
GCAATTACCG ACGACACATA TGCAAATGCC AGTCCAGTTT GTGCAGCGAT GTCGACTGGT
GAGATTCTTC TCGCCTGGAA ACGCCTACCC GAAGACCTCA CGGCAAGTGG AGAGCAACTG
GACACGCTTG CTGCGGTCAA CAACACACGA GACAAAGCGG AAATTGCCTA CAGCATTTAC
GACGGGAATT CGTGGTCGGA TCCGACGCTG CTCACAAGCA CGAGCGTTAC CCAACGACGT
CCAACGGTAG CCAAAGCGGA CGGTGAATGG CATCTAGCCT GGGAGTCGTT CGACCGCGAG
ACGGGTTCGA CGACTGTTCG CTCGACAGTT GTCTCCCCAG ACGGAACGAC AGCGCCCATC
TCAGAGTGGT CCGGGGCTGC AAGCCCGGAT CTGGGACGGC GCAACGATGG CACTGTCGAT
CTCGCATATC TTGTCTGGGA TGGAGCGCAG GTCACGGGTG TAACTCACAC AATCCGTGAT
GGAACGGCGA CTATGTCCGA CCAAACCTAT AGTGCGACGG CTGCTGATAC GGTCGTCGTT
TCGAATGGAC GGGTCCTTTG GGCGACGAAT ACAAACCGAG ACCCGACCTT GGTCGAAGGA
ACAGACGGGA CGACAACCGA ACTGTCTCTT CGTGAGGATG TTGCGGAGGT CCGGGAACTG
TCTTTTTCGT CGCGGTCAGA CGAGGCGATA CTCTCCTATA TCTCGACGCT GGAAGGAAAA
GACACTCGCG ATCAAGTGTA TCGACTCGAT CGTGGCAATG GCTGGATTTT TGATCGGAGA
ATCACCGAGA ATATCAAAGA TGGGCTTCGG GTTCGGTACA GTGATCTAGT TTTTGCCGGG
AGCGCTTCGT TCCTCTCGGC CTACGCTGTC CGTGATACAG GGACTGATGC GGTGAGTGAC
GTGTTTGCGA CCCTTCAGGA GTTCGGTCCT GCATACGCCA TTGATGGATC GATCGATAGT
GGTACAGCGG GCGGAGAAAC GACATTGTCC TACACGCTGG AGAACCGCGG CGACGTTGAC
GGGGCAGAAC AGGTCACTGT TAGAATACTC CGTGATGGAA CAGAAATCAA GGCGATCACG
CACAAGCCCT TGGAGTCCGG CGGAACGCTG GCTCGCAATT GGACAGTCAC GGTCGGTGAT
GGGGGCGAGT TCGAACTCCA GTTGGATGTG CCGGAACCGT CGCTTGAGAC AGAACCACAC
AGTGTCGAGT TGATTGCTGC GACTGTCCAG CTACGTGTTG ATACAGTGGC TGCGACGCGG
ATCGGACCGA GCGAAGCGAC AATCGCCGTG ACAGTCACGA ACCATGGCGG TGCGGTCGCT
GAGAACGTAC CTGTGGAACT GAGCGATGCC GCTGGTCCGG TAGGCACACC AATGCTCGAT
CGAATCGAGC CAGAAACGAC CACCACTGTC GAGACTGTCA TTGACCCAGT GTCGCTGGAC
AACTCCGACA CCCATACTGT TCGACTTGAT CCAAATGAGA GACTCCCGCC ACAGGCAGAA
ACAACTTCGC TACGCCGAAC GTACTTGGTT CGTCCAGACC TTCGTGTTGA GGATATCCGC
TACCGAGAGG ACAATGATCG ATTCGTTCGA GTGCTCGTGT CGAACCATGG TCCAGGCGAG
GGAACAGCGA GCCTTACGAT TAGAGACGGC ACCGACACGG AACTGGCGAC GACAGATATC
TCATTGCCGC CGGCGAAGAC AGAAAACGGG AGTACTGTTG CAGTGCATCG CGCCATTGAT
TTACAGGTTC CAACCCTGGA ACCGGCGCAA ACGGTTGCCA TCGAGGCGGA GCCAGACGTA
AGTAATCTGC ACCAGGAGAC ACTTTCCCGC GTCGAGACAG CCGAGCCGAT TTTGCCGGGA
GAGTACAGAG GCGATGTTGG TGATCTCACT GTGAATGCCT CTAATGAGAC CATTCCAGTC
GGCGGAGAAG CATCAATCGA TGTTTCTGCG GACAATGTCG GGCAACTTAT AATCGAAAAT
ATCTGGACGG ACTGGACAGT GTCTGTCGAT GTACCAAGCG ACATCGTCGA GAAATCTGTC
GAAGCCAACG GCAGAGTGAC ACTCACTTGG CCAAGTACGA AGAGTGCTGT TTCGCCAACG
CTGGCAATAT CAGTACCTGA CCGTTACATC GGTGGGACAT ACGAAGTGAA CCTCACTGCA
ACAAACGCAA GCGATGTCGC CGAAACCACT TCGATGCTCG TCATAAAATA A
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| Protein sequence | MAKDDTFLSD DFEEYAIGSF PGRWQQSGNS DQKIVDEPVT SGDKALQLVG SYGSCWQALA
HRELGSSLPK DESVIVRGEI DPTGEGGGGC HGTKNGSIDI RENPSAWPNV GFKRKLIQFD
AEGSVRGGGI DLGSCEIGVY NSFKIEYYWD SNGEEVNLQY QINGEFRGET TVDVQTNDSG
DVVESKLQYL TVVSGDYKIH VDRLSIVSGS DIITRPDLNS EISVSTATTS PGNQITFDAS
KSTGQIDTYK WEFSDDTSAT GLTVTRSFDT TGIYSITLTT VDGDETDTTT SEVAVVRETE
LNFSAQPAQP VTGQSVTFEG TGGNSYTWDF GDGRGATGQQ VTHTYDESGD YRVTLATEQD
TVTRTISVNS ANIEIANLDR DIGGTLLPKL GIDEGVEATI NTADGQDIDR VEFYFAGQKA
ISKSPPYDAS LTIDDIEPPA TPLTVRAVTT DGMQQDFQQD IPIQRLPDWL EFLLKSTDTL
GVALTDEEIE ITYTPLSNLA PGIDIPNDLL GGDESPRENG DGDYDFGVAM GGIYDPRTNE
AELTAAGNIT AEVMALAFEI KVALIGEIEA TTLELQSAQA DIDSLLSFDV APPTIPVPVS
IPIPGTDSAI GIVPTILISA DGTFDFNADL SFDTGTVEPG VELQVSIGIA LELPALPDGE
LKGVPSGGID GQFDVGTDDW NIQATFFLAG KVVLDPPFLP GITLEQDPIW DQPLTGSTTE
QVTATTVSRP RVCHKSAGGP QPLPEIDSVD TVSVDTDTIS PRESFRLTDR PYEDIEPVLA
SPAENTQVVI WGQQAENKPA DAGHDLVGRW YENGSWSKTF AITDDTYANA SPVCAAMSTG
EILLAWKRLP EDLTASGEQL DTLAAVNNTR DKAEIAYSIY DGNSWSDPTL LTSTSVTQRR
PTVAKADGEW HLAWESFDRE TGSTTVRSTV VSPDGTTAPI SEWSGAASPD LGRRNDGTVD
LAYLVWDGAQ VTGVTHTIRD GTATMSDQTY SATAADTVVV SNGRVLWATN TNRDPTLVEG
TDGTTTELSL REDVAEVREL SFSSRSDEAI LSYISTLEGK DTRDQVYRLD RGNGWIFDRR
ITENIKDGLR VRYSDLVFAG SASFLSAYAV RDTGTDAVSD VFATLQEFGP AYAIDGSIDS
GTAGGETTLS YTLENRGDVD GAEQVTVRIL RDGTEIKAIT HKPLESGGTL ARNWTVTVGD
GGEFELQLDV PEPSLETEPH SVELIAATVQ LRVDTVAATR IGPSEATIAV TVTNHGGAVA
ENVPVELSDA AGPVGTPMLD RIEPETTTTV ETVIDPVSLD NSDTHTVRLD PNERLPPQAE
TTSLRRTYLV RPDLRVEDIR YREDNDRFVR VLVSNHGPGE GTASLTIRDG TDTELATTDI
SLPPAKTENG STVAVHRAID LQVPTLEPAQ TVAIEAEPDV SNLHQETLSR VETAEPILPG
EYRGDVGDLT VNASNETIPV GGEASIDVSA DNVGQLIIEN IWTDWTVSVD VPSDIVEKSV
EANGRVTLTW PSTKSAVSPT LAISVPDRYI GGTYEVNLTA TNASDVAETT SMLVIK
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