| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2121 |
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| Symbol | |
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| ID | 8384415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 2160083 |
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| End bp | 2161750 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644973190 |
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| Product | chaperonin Cpn60/TCP-1 |
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| Protein accession | YP_003131021 |
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| Protein GI | 257053188 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.148274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGGAC AGCCGATGAT CGTCCTCGGC GACGATGCGG ATCGTCTCAA GGACAAAGAC
GCCCAGAGCC ACAACATTTC GGCAGCCCGC GCGGTCGCCG AGTCGGTCCG CTCGACGCTC
GGACCGAAAG GGATGGACAA GATGCTCGTC TCCTCGATCG GGGACGTGAC CGTCACGAAC
GACGGTGTGA CGATCCTCGA CGAGATGGAC ATCGAGAACC CGACGGCGAA GATGATCGTC
GAGGTCGCCC AGACCCAGGA GGACGAGGCG GGCGACGGCA CGACCACGGC CGTCTCGCTT
GCTGGCGAAC TCCTGAAAAA CGCCGAAGAC CTCCTCGAAC AGGATATTCA CCCGACCTCG
ATCATCCGCG GGTACGACAT GGCAGCCAAG CGGGCCCGCG AAGAGATCGA CGACATCGCG
GTCCCGGTCG AGCCCGACGA CGAGGAGATG CTCAAGAGCG TCGCGGCGAC GAGCATGACC
GGCAAGGGTG CGGAACTCAA TCTGGACCTC CTCTCCGATC TGGTCGTCGA CACGGCGCAG
GCGGTCGCCG TCGAGGCCGA CGACGGCTCG ACGGTCGTCG ATCTGGAGTT CGTCGACATC
AAGTCCGCGC CCGGACGGCC CGTCGACGCC TCCCAGATCG TCCGTGGTGG CACCATCGAC
ACGGATCCCG ACCACGAGGA CATGCCGAAA GAGGCCGAGG ACGCCGACAT CCTGCTGCTG
GATGCGCCCT TCACCGTCAA CGAGATGGAA AACGACGCGC AGTTGAGCGT CGACGACCCC
GACCAGCTCC AGGAGTTCAT CGAGCAGGAG GAACAGGCGA TCCGGGAGAA GGTCCAGGCG
GTCGCCGACG CCGGCGTCGA CGTCGTGCTC TCGAAGAAGT CCATCGACGA GATGGCCCAG
CACCTGCTCG CGCGCGAAGG AATCCTCTCG ATCAGCCAGA TCAAGCGAAG TGACCTCGAG
TTCCTCAGCG AAGTCCTCGG AACCCAGCTC CACTCGAACC TGGACTTCGA GTCACTGTCG
GCGGAGGACC TCGCCACGGG CGATATCTCG CGGGACCCCG AAGACGGGTG GTACGTTGTC
GAAAGCGACG GCAACCACGG CGTGACACTG GTCATCCGGG GCTCGACCGA GCACGTCAGC
GACGAGCTCG AACGCGGTAT CACCGACGCA CTCGACGTCG TCGCGGCGAC GATCACCGAC
GGCCGCGTGC TGGCCGGTGG TGGCGCGACC GAGGTCGAAC TCGCCGACCG ACTCCGGGAG
TACGCTGACG GCGTCAGCGG TCGCGAGCAA CTCGCCGTCG AGGCGTTCGC GGACGCCTTC
GATCTCATCC CGCGCGTCCT CGCGGAGAAC GCCGGACTCG ACTCCATCGA CACGCTGGTG
GAACTGCGTT CGGCCCACGA GAGCGGCGAC GGTCACGCGG GGCTTGACGT CTTCGACGGC
GATGTCGTCG ATACGTTCGA GGCTGGCGTC GTCGAACCCG CACACGCGAA ATCCCAGGCA
GTGAGCAGTG CGGTCGAGGC CGCAAACCTC GTGCTCAAGA TCGACGACAT CATCTCGGCG
ACCGCGCTGG GCGAAGACTA CGAGGACGAG GACGACGGCC AGGGTGGCGG CATGGGCGGT
ATGGGCGGCG GCATGGGTGG CATGGGCGGC ATGGGCGGCA TGATGTAG
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| Protein sequence | MQGQPMIVLG DDADRLKDKD AQSHNISAAR AVAESVRSTL GPKGMDKMLV SSIGDVTVTN
DGVTILDEMD IENPTAKMIV EVAQTQEDEA GDGTTTAVSL AGELLKNAED LLEQDIHPTS
IIRGYDMAAK RAREEIDDIA VPVEPDDEEM LKSVAATSMT GKGAELNLDL LSDLVVDTAQ
AVAVEADDGS TVVDLEFVDI KSAPGRPVDA SQIVRGGTID TDPDHEDMPK EAEDADILLL
DAPFTVNEME NDAQLSVDDP DQLQEFIEQE EQAIREKVQA VADAGVDVVL SKKSIDEMAQ
HLLAREGILS ISQIKRSDLE FLSEVLGTQL HSNLDFESLS AEDLATGDIS RDPEDGWYVV
ESDGNHGVTL VIRGSTEHVS DELERGITDA LDVVAATITD GRVLAGGGAT EVELADRLRE
YADGVSGREQ LAVEAFADAF DLIPRVLAEN AGLDSIDTLV ELRSAHESGD GHAGLDVFDG
DVVDTFEAGV VEPAHAKSQA VSSAVEAANL VLKIDDIISA TALGEDYEDE DDGQGGGMGG
MGGGMGGMGG MGGMM
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