Gene Huta_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2113 
Symbol 
ID8384407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2149476 
End bp2151116 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content68% 
IMG OID644973182 
Productchaperonin Cpn60/TCP-1 
Protein accessionYP_003131013 
Protein GI257053180 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02339] thermosome, various subunits, archaeal 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAC AGGCTGGCGA CCCGACGCTT TCGGTACTCT CAGAGGAGTC CCAGCGCATC 
GACGGCAAGG ACGCGCGTTC GATGAATCTC ACGGCCGCCC GGGCGATGGG CGAGGCCGTC
AGGACGACGC TCGGTCCGCG AGGCATGGAC AAGATGCTCG TCGACTCGAC GGGCGACACT
GTCGTCACGA ACGACGGCGT CACCATCCTC GACGAGATGG AGGTCGAGCA CCCAGCGGCC
AACATGGTCG TCGAGGTGGC ACAGAGCCAG GAGCAGGAGG TCGGCGACGG CACCACCTCG
GCGGTGATTC TCACGAGCGC GTTGCTCGAC GCGGCCGAGG ACTTGCTTGA AAACGACGTG
CACCCGACGA CGATCACCGC CGGGTTCGAG CAAGCGGGCG ACCACGTCGC GAGTGTCCTC
GACGACCTGG CGATTGATCT CGACGCCGAG GACACGGAGA CGCTCGAAGC GATCGCCTCG
ACAGCGATGA CCGGCAAGGG GGCCGAATCC GAGAAGGACC ATCTGACGAC GCTGGTCGTC
GACGCCATCC GGGCGGCGGT GCAGGCGGAC GGCACGGTCG ATCGCGACGC CGTCACGATC
AAGACCTTCG CGGGCAGCAA CCTCGCCGAT TCGCGGCTGA TCGAAGGGGT CACCGTCAGC
AAGAACCCGC CACACGACGC GATGCCGACG GACCTCGCCG AGGCCGACGT ACTGGTGTAC
GAGGGAGAGA TCGAAGTCCC GGAACTCGAG ACCGCGACCG AGACCCGCGT CTCGGACTTC
GAGGAGGTGA CCGAGTACCT CGATCAAGAG CAGGCGGCCA TCCAGGAGGA CGTCGAGGCC
ATCCTCGAAA CCGGGGCGGA CGTCCTGATC ACGGAGGGCG GGATCGACGA TCCGGCCCAG
AAACTGCTTG CTGAGGCGGA CATCCTGGCA CTGCGCCGTG TCGACGACGA GGACCGACGG
CGACTCGCCG AGGCGACCGG TGCGTCGCGG ATTTCGGACC TCGAAGCCGC GACACCCGAG
GATCTAGGAC GGGCCGGGGA AGTCGGCCAG GAACGGGTTC GGATGCCGCT GTGGCGCGGT
GACGCCCGAC CCGAGCGGAT CACGTCCTTC ACCGACGTCG ACAGCGTGGC CGGGACGATC
GTCCTCCGGG GCGGGACCGA ACACGTCGTC GACGAGGTCG AACGCGCACT CGAGGACAGC
CTCGACGTGC TCGCGGCGGC CATCGAGGAC GGCGAGATCC TGCCGGGGGC CGGAGCGGTC
GAGATCGAAC TCGCACTCGC ACTCGAGGAC GCGGCCGACG GGGTCAGCGG GCGCGAGCAA
CTCGCCGTCG AGGCCTTCGC CGACGCGCTC GACATCTCGC CGCGGACGCT CGCGGAGAAC
GCCGGCCACT CCCCGATCGA CGCGCTCGTC GACCTCCGCG CGCGCCACAC CGACGGCGAG
GTGAGCGCCG GAATCGATGC CGAGAGCGGC GAACTCATCG ACGCAGCCGC CGAGGGAATC
GTCGAACCCC GCCGTGTGAA GGCGACGGCG TTCGACGCAG CGATCGAGGC GGCACGGACG
ATCCTCCGGA TCGACGACGT CGTCTCCGCC GGCGATCTCT CGACGAGCGG CGACGACGAC
GGCGGCGCAC CCGGAATGTA G
 
Protein sequence
MAQQAGDPTL SVLSEESQRI DGKDARSMNL TAARAMGEAV RTTLGPRGMD KMLVDSTGDT 
VVTNDGVTIL DEMEVEHPAA NMVVEVAQSQ EQEVGDGTTS AVILTSALLD AAEDLLENDV
HPTTITAGFE QAGDHVASVL DDLAIDLDAE DTETLEAIAS TAMTGKGAES EKDHLTTLVV
DAIRAAVQAD GTVDRDAVTI KTFAGSNLAD SRLIEGVTVS KNPPHDAMPT DLAEADVLVY
EGEIEVPELE TATETRVSDF EEVTEYLDQE QAAIQEDVEA ILETGADVLI TEGGIDDPAQ
KLLAEADILA LRRVDDEDRR RLAEATGASR ISDLEAATPE DLGRAGEVGQ ERVRMPLWRG
DARPERITSF TDVDSVAGTI VLRGGTEHVV DEVERALEDS LDVLAAAIED GEILPGAGAV
EIELALALED AADGVSGREQ LAVEAFADAL DISPRTLAEN AGHSPIDALV DLRARHTDGE
VSAGIDAESG ELIDAAAEGI VEPRRVKATA FDAAIEAART ILRIDDVVSA GDLSTSGDDD
GGAPGM