| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2108 |
|---|
| Symbol | |
|---|
| ID | 8384402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2144547 |
|---|
| End bp | 2145062 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644973177 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_003131008 |
|---|
| Protein GI | 257053175 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.135413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTGC CCTTCGACGT CGTCGACCTC GGCCCGGCCG AGCATCCTCA GTCCGGCGAA
GCGGCCCCGG ACTTCGAGCG CCCGCTGGTC ACCGATGAGT ACTGGGAGGA CGTCGCGCTG
TCAGATCTCA CGGCCGACGG TCCCGTCCTG CTCGTCTTCT TTCCGATGGA CGGGAGTTTC
CCGGCGACGT ACATCTGGAA CGAGATCACC GAGCGCGGGT GGGGCAGCGG CGACGACCTG
ACCGTCGTCG GGCTCTCGAT CTCCTCGCCC TACGAGCACA AGGACTTCAT CGCGGAGGCG
GCCCTGCCCT ATCGGCTGTT CAGCGACCCA CAGAATGGTG TTGCCGAGAC CTACGGGATC
GTCCACGATC TCGACGGGAT GGCGGGCGTC AGCGAGCCCC GCCCGGCCGC GTTCCTCATC
GACGGAGACC GGACTGTCGA ATACGCGTGG GTCGCGGCGG AATGGCCGGA GTTCCCGGAC
TACGACGCGA TCGCGGCGGC GATCGGCGAT CTCTGA
|
|---|
| Protein sequence | MELPFDVVDL GPAEHPQSGE AAPDFERPLV TDEYWEDVAL SDLTADGPVL LVFFPMDGSF
PATYIWNEIT ERGWGSGDDL TVVGLSISSP YEHKDFIAEA ALPYRLFSDP QNGVAETYGI
VHDLDGMAGV SEPRPAAFLI DGDRTVEYAW VAAEWPEFPD YDAIAAAIGD L
|
|---|
| |