| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2100 |
|---|
| Symbol | |
|---|
| ID | 8384394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2137534 |
|---|
| End bp | 2139363 |
|---|
| Gene Length | 1830 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644973169 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_003131000 |
|---|
| Protein GI | 257053167 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.624892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATG CAACCAACGC GGACGTTGAC AGCGTCACGC TGACGATCGA CGGTCAGGAG
GTACAGGCAG CGGCGGGCGA GACGATCTTA GAGGCAGCCG ACCGGGCCGG CATCGACATT
CCGACGTTGT GTGCCCACGC CGACCTCGCG AACGTCGGTG CGTGCCGGAT GTGTCTGGTC
GACATCGACG GCGAACGACG TGAGACGGCC TGTACGACCG CCGTCGACGA GGGGATGGCG
GTCGACTTCG ACAGCGAGGA ACTCTGGGAG AAACGACGGT CCATCCTCGA GTTGCAGTTC
ACCGAGGAGA ACCACTACTG CATGTACTGC GAGATGGAGG GCGACTGCGA ACTCGAGGAC
ATGTTCAACC GCGCGGGCCT GGACAAGGAC CGCTTCCCAC TGGAGTACAA GGACATCGAG
CCGGACACCT CAAACGAGTA CATCACGATG GATCTCGACC GCTGTATCAG CTGCGGTCGG
TGTGTCCGGA CCTGCGAGGA AGTCGTCGGC AACGACACGC TGAACTTCGG CAACCGCGGG
AAGGACACGA CGATCATCGC CGACTCCGGC GTCCCGCTGG GTGAGTCCTC GTGTACGTCC
TGTGGTGGGT GTGTGCAGGC CTGTCCGACG GGGTCGCTGT ACAGCCCGCT CAGCGCCTAC
AAGGGCCGCG AACGGGACTG CGAGGTCGAG ACGACGACCT GCAGCGAGTG TTCGGTCGGC
TGTGAGATGG AGGTCTACAC CAACTCCGGG CGGATCGTCA AGATCGAGGG CGTCAAAGGC
GGCGCGGACG GCAGCCAGCT GTGTGAGATG GGTCGCTTCG AACTGCTCGA TGACCGCCGT
GATCGGATCA CCGAGCCTGA GATCGACGGC GAGACGGTCG ATCTCGACAC GGCTATCGAG
ACGGCCAGTG CGGAACTGGC CGACGCCAAC TCCATCAACG CGGTCGCGTC GGATCGGCTT
CCCACGGAGA CCCTGGACGC GTTCGCCGAC GCGATGGACG ATCTCGACGC CGACCTGGAG
ATTCCCGGGG CAGCGCGACG GGCCACGGAG GCGACGATCC GCGAGGAACT GGCCGCCGAC
GGCCACGAGG ATCTGCCGGC CGACTCGGTC GAGGATATCC TCGAGGCCGA GGGGATCGTC
GTCTACGACA CTTCGATCGT CGACACCCAT CCCGTCGCCG CGTCGTACGT CCGCCGCGCG
GCCACGGATG GCGCGGAACT CGTCACCGTC GACGGCGACG AAGATCGCCT GAAGCGGTTC
AGCGACGAGA GCCTGACGGT CGGCTCGCCG CTCGCCCAGG CCACCGCGGA GGCCGCCGGT
GCGGTCGCCG ACGGCGGGAG CGCCTCGCCG GTCGCGGGCG TTGCCGAGGC CGCGACCCGC
ACGCTCGACG CCGAGGACAG CGTCGTCGTG CTCGGCCCCG AGATCGAGGA CACCGAGGCA
CTGGTCGACG CCTACGGGCT TGCGGCGATG ACCGAGAGTG AGGTCGTGAG CCTGGATCGG
GGTGCCAACC GTGCCGACTT CACGGCCGAC GGCATCGACG AAGCGAGCGA GGTCGCGTAC
CTGCTTGCCG CCGCCGACCG AGGCGAGGAT CTCGACCGGG CGATCGAGGT CGCCCGCGGG
GCCGACACCG TGATCGTCCA GGCGACCCGT GAGTCCGCCC TGACGCAGAT CGCCGACGTC
GTGCTCCCGG CCGTCGACTG GTTCGAGCGC GAGGGGACGA TCGTCGACGC CGACAACGAG
GAGCGAGCGG TCGAGCAGGT GCTCGATCCA CGCGGTGAGA TCGACGACGA CCGTGAAATC
ATCGCGGAAC TCCAGGAGGT GGCAGCATGA
|
|---|
| Protein sequence | MSNATNADVD SVTLTIDGQE VQAAAGETIL EAADRAGIDI PTLCAHADLA NVGACRMCLV
DIDGERRETA CTTAVDEGMA VDFDSEELWE KRRSILELQF TEENHYCMYC EMEGDCELED
MFNRAGLDKD RFPLEYKDIE PDTSNEYITM DLDRCISCGR CVRTCEEVVG NDTLNFGNRG
KDTTIIADSG VPLGESSCTS CGGCVQACPT GSLYSPLSAY KGRERDCEVE TTTCSECSVG
CEMEVYTNSG RIVKIEGVKG GADGSQLCEM GRFELLDDRR DRITEPEIDG ETVDLDTAIE
TASAELADAN SINAVASDRL PTETLDAFAD AMDDLDADLE IPGAARRATE ATIREELAAD
GHEDLPADSV EDILEAEGIV VYDTSIVDTH PVAASYVRRA ATDGAELVTV DGDEDRLKRF
SDESLTVGSP LAQATAEAAG AVADGGSASP VAGVAEAATR TLDAEDSVVV LGPEIEDTEA
LVDAYGLAAM TESEVVSLDR GANRADFTAD GIDEASEVAY LLAAADRGED LDRAIEVARG
ADTVIVQATR ESALTQIADV VLPAVDWFER EGTIVDADNE ERAVEQVLDP RGEIDDDREI
IAELQEVAA
|
|---|
| |