Gene Huta_2099 details

Gene Information

• Locus tag: Huta_2099
• ID: 8384393
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2135625
• End bp: 2137529
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644973168
• Product: NADH dehydrogenase (quinone)
• Protein accession: YP_003130999
• Protein GI: 257053166
• COG category: [C] Energy production and conversion
• COG ID: [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0860011
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAACTG TACTCACCGA ACCGCGAAGG GTTCGCACGG AAGACGATCT GGCCGACCTG 
CAAGCCGAAG GGAAACAGTC CCTCTACCCC GACGAGACGA AAGTCCTTGT CGGGATGTCC 
TCCTGTGGGA AAGCCGCCGG GGCGGACGAT GTCTACGGGC TGCTATCCGC TGAACTCGGG 
CCCAACGACG ACGCCACGGT CGAGAAGACC GGCTGTATGG GCTTCTGTGA TCGGGAACCG 
CTTGTCGAGG TCATCCGCCC CGACGGGGTC TCGATCATCT ACGAGAACGT CACGCAGGAA 
GACGCCAGCC AACTCGCCGG GGCCGTCGAA GACGGCGAGT TGCCCGCTGA AGGGGCTCTC 
GCCGCCCGGA GCCACGCCGA GGACTGCAAC CACGATCACG GTGTCCCGCA AATCGACGAG 
GTTCCGTTCT ACGAGTCCCA GCAGCGCGTC GTGCTGGGCA ACAGCGGCCT CGTCGATCCC 
GAGAGTCTCG AAGAATACGT CGCCCGTGAC GGCTACTTCG CGCTCTGGGA GTCCCTTTCG 
GCGGGCTCGC CCGAGGAGGT CATCGAGGAA GTCAAGGAAT CGAACCTTCG GGGTCGCGGT 
GGCGGTGGCT TCCCGACGGG GATGAAGTGG GAGTTCCTCG CCGGCAACGA CGCCGATCTG 
AAGTACCTCA TCTGTAATGC CGACGAGGGC GACCCCGGTG CGTACATGGA CCGGACGCTC 
TTAGAGAGCG ATCCCTACGC CGTTCTGGAG GGCATGACCA TCGCCGGGTA CGCCCTGGGT 
GCCGAGAAGG GGTACATCTA CGTCCGCGCC GAGTACCCCC TGGCGATCGA GCGCCTCCAG 
CACGCCATCG AGCAGGCTCG CGAGGCCGGA CTGCTGGGCC AGGATATCTT CGGCGAAGGA 
TTCGATTTCG ATCTGGAGAT CAAGAAGGGC GCGGGGGCGT TCGTCTGCGG TGAGGAGACC 
GCGATGATCA ACTCCCTGGA AGGCGGCCGC GGGATGCCCA AACCCCGTCC GCCGTACCCC 
GCCGACGAGG GGCTGTGGGC CGAGCCGACC AACGTCAACA ACGTCGAGAC GTGGGCGAAC 
GTGCCGGCGA TCCTCCGGAA CGGCGCGGAG TGGTTCGCCG ACATCGGGAC CGAGGAGTCC 
GGCGGGACGA AGGTGTTCTC GGTCACGGGC GACGTCGAGA ACACCGGTCT CGTCGAGGTC 
CCGCTTGGCA CCCGACTCGA GGAAGTCGTC TTCGAGATCG GCGGCGGGAC CACCGGCGGC 
GAGTTCAAGG CCGTCCAGAC CGGCGGTCCC TCCGGCGGTG TCATTCCCCG GGAGCACGCC 
GAGACGCCAA TCGACTACGA GACGCTGATG GAACTCGGCT CGATGATGGG CTCCGGTGGG 
ATGATCGTCA TGGACGAGTC GACCTGTATG GTCGATCAGT CCCGGTTCTT CCTCGAGTTC 
AGCGTCGACG AGTCCTGCGG GAAGTGCCCA CCCTGCCGGT ACGGGACCAA GCAGATGCTC 
GAAATGTTGG AGGGAATTAC CAACGGGGCG GCTGATCCCG ACGTCATCTC CGAGCTCCGG 
TCGCTGGGCG ATTCCATGGA GGAGATGTCG CTGTGTGGTC TGGGCCAGAC GGCGGCCAAC 
CCGGTGATGA GCACGCTGGA TTACTTCGAG GACGAGTACC GCAACCACGT CGAAGACGAG 
GAGTGTCCCG CCGGGGACTG CGAACTCGGC AGTGGCGAAC ACGCGGGGAC GTACAAGATC 
ATCGCCGAGG ATTGTATCGG CTGTCAACAG TGTGTCGACG CCTGTCCGAT CGACGCGATC 
TCGGGCGAAC CCGGCGAGGT TCACGAGATC GATCCGGCGG CCTGTGTCGG CTGTGGACAG 
TGTGTCGACC CATGTCCGGT CGACACTATC GAGTTGAGGG GTTGA 

 

Protein sequence

MSTVLTEPRR VRTEDDLADL QAEGKQSLYP DETKVLVGMS SCGKAAGADD VYGLLSAELG 
PNDDATVEKT GCMGFCDREP LVEVIRPDGV SIIYENVTQE DASQLAGAVE DGELPAEGAL 
AARSHAEDCN HDHGVPQIDE VPFYESQQRV VLGNSGLVDP ESLEEYVARD GYFALWESLS 
AGSPEEVIEE VKESNLRGRG GGGFPTGMKW EFLAGNDADL KYLICNADEG DPGAYMDRTL 
LESDPYAVLE GMTIAGYALG AEKGYIYVRA EYPLAIERLQ HAIEQAREAG LLGQDIFGEG 
FDFDLEIKKG AGAFVCGEET AMINSLEGGR GMPKPRPPYP ADEGLWAEPT NVNNVETWAN 
VPAILRNGAE WFADIGTEES GGTKVFSVTG DVENTGLVEV PLGTRLEEVV FEIGGGTTGG 
EFKAVQTGGP SGGVIPREHA ETPIDYETLM ELGSMMGSGG MIVMDESTCM VDQSRFFLEF 
SVDESCGKCP PCRYGTKQML EMLEGITNGA ADPDVISELR SLGDSMEEMS LCGLGQTAAN 
PVMSTLDYFE DEYRNHVEDE ECPAGDCELG SGEHAGTYKI IAEDCIGCQQ CVDACPIDAI 
SGEPGEVHEI DPAACVGCGQ CVDPCPVDTI ELRG