| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2060 |
|---|
| Symbol | |
|---|
| ID | 8384354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2088965 |
|---|
| End bp | 2091148 |
|---|
| Gene Length | 2184 bp |
|---|
| Protein Length | 727 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644973129 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003130960 |
|---|
| Protein GI | 257053127 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.697893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCCCT CATCCAACGA CAGCACATGT GCGTTCGTCC TCAAGGACAC CTCGACCCCC
GCGCTGACGG GCCCCTGGCA CTGTCCACAC GACGCACTCG CTGACCAGAA GCGGTGCGTG
TTTCACCACA CGGCCGCCGA GCGTGCGGAA CTCGACATCG CTGACGAGGC GGTTCGCGAG
CATTTCGAGG CGGCACTCGG GAGCGGCGAC CCCGAGCGGC GGGCCTTCGT CGGTGCGACG
CTGCCGAGCC TGGACTTCGA TCATCTCGAC TTCGACCACG ACGATCAACA CCTGCTCGAT
CTTCGCCACG CATGTATTCA CGGCGACTTC GTGGCGAGTT ACGCCCGGTT CGAGGAGGCT
GTCGATCTCC GCGACGCGAA ACTCGGGACG CTCGAACTCG ACGGCGGCAC TTTCCATGAC
GGATTTTTCT GCAAGCGAAC GACCTTCGAG GGGGACGTCG ACTGTGACCG CGCGACCTTC
AGCGGCCACG TGGCCTTCGA CGGCGCGACC TTCGAGGGCC CCGTGCGATT CGACCAGGCC
ACCTTCGGCG ATCCCGCCAC CTTCGACGAC GCGACGTTCC GCGAGCGCGC GACGTTCCTC
GGTTCGGCGT TCCGCGGCCG GGGGATCGAC GTCGACGACT ACACCTCCTT CGAGGGTGCC
ACGTTCGAGG ATGTCGTCCG GTTCGATCAC ACGCACTTCG AGGCTGCCAG TTTCGAAGCG
ACGCGGTTTT CGGACGCAGT ACACTTCGAT GAAGCGACGA CGACCGCGCC CGTCAGGTTC
GACCGGGCCA CCTTCGAATC GGCGGCCACC TTTGACGGGT CCACCTTCGA GGACGACGCG
TCCTTCGCGG CGGCCACCTT CGACGGCGAG ACGAACTTCC GGGGCGTCAC GTTCGAGGGT
GGCGGGACGG TCCTGCATCG CGACGCCGAC TTCTCCGAGG TCCGTTTCGC CCGGGCAGTC
AGCTTCGAAT CGGGGGATAT CGGCGCGGTG ACCTTCGAAG ATACGACGTT CGACGGCGAC
GCTCGCTTCC ATGACGTCCT GTTTCAGGAA CGGGCGAGTT TCCAGGCCGC GACCTTCGCC
GGTGAGGCCG TCTTCGACGC GGCCACCTTC GACGACGAAG TCACCTTCGA GGGCGCGACC
TTCGAGGGGC CCGCGAACTT CCCCGGCGTC GAGTTCGAGG GCTCGAACAA CCACGACAGC
GCCAGCGTGA CCTTCGACGA GGTCCGCTTT TCGGGTGACG CGAACTTCCA TCACGCCTGG
TGTACCTCCG CGAGCTTCTG GGAGGTCTCC TTCGAGCACG CCGCGTGCTT CACCGAGGCC
AAGTTCACGA AGCACCTCGA CCTGAAGGTG AGCGAAAACG GGGGCGATAC CGTCGTCAAC
TTCACTGACG CCGTCCTCGC GGACGGGGAG ATCGTCCAGC CGGACGGCGG CGGGGTCCGG
TACGACCTCA CCATCGCGAC GCTCGGCAGC GTCGGCTTCA GCGTCGAGAG TGGTGCCCAC
CGGGATCTTT TCCAGTACGT CCGCTTCTGT GACACCACCT TCGAGAACTT CGACTTCACC
GCCCACGCTC ACTTTCTCAC CCGATCGGAC TGGCGACTCC ACGACTTCGA CGACGACGGC
CTCGAATACG AGTACGCCGT CGAGATGACG TCACTGAACG TCGAGAAGAC CTACCAGCGG
GCCAAGACCA GCGCCTCGAC GGCCGGTAAC GTCGAAGCCT CCGGGAAGTT CCGGTTCAAG
CGCCAGCAGT TCGCCCGCCG AAACTACAAG GACATCGCCC GCGATCCCGC GGAACCATTC
CGGACGCGGA TCCGCAACGG CCAGCGCGTG GCCGAGAACC TGTTTCTGGG ACTCACCTGT
GGCCACGGGA TGCGACTGTA CCGGATCGCC GCGATGTTCA TCTTCTTCCC CGTCCTCCCA
GCGTTGCTGT ACACGTTCGG CGGCCCCCCG TTCCGGACCG GGGCCGGCCA GGTCCACTCG
ATCGCCGATT TCATCTCGAT GGGCGGCATC GAGACGTTCG CCGCAAACCT CCACTTCAGC
TACATCACCT TCCTCACGAT CGGCTACGGG AACGTCGTCG CCGAGGGCAA CCTCGGACTC
GTGCTGGTCA GCATGGAGGC CTACGCCAGC GTCGTACTGG GTGGCCTGTT CATCTACGTC
CTCATCAAGC GGAGTGAGCT CTAG
|
|---|
| Protein sequence | MTPSSNDSTC AFVLKDTSTP ALTGPWHCPH DALADQKRCV FHHTAAERAE LDIADEAVRE
HFEAALGSGD PERRAFVGAT LPSLDFDHLD FDHDDQHLLD LRHACIHGDF VASYARFEEA
VDLRDAKLGT LELDGGTFHD GFFCKRTTFE GDVDCDRATF SGHVAFDGAT FEGPVRFDQA
TFGDPATFDD ATFRERATFL GSAFRGRGID VDDYTSFEGA TFEDVVRFDH THFEAASFEA
TRFSDAVHFD EATTTAPVRF DRATFESAAT FDGSTFEDDA SFAAATFDGE TNFRGVTFEG
GGTVLHRDAD FSEVRFARAV SFESGDIGAV TFEDTTFDGD ARFHDVLFQE RASFQAATFA
GEAVFDAATF DDEVTFEGAT FEGPANFPGV EFEGSNNHDS ASVTFDEVRF SGDANFHHAW
CTSASFWEVS FEHAACFTEA KFTKHLDLKV SENGGDTVVN FTDAVLADGE IVQPDGGGVR
YDLTIATLGS VGFSVESGAH RDLFQYVRFC DTTFENFDFT AHAHFLTRSD WRLHDFDDDG
LEYEYAVEMT SLNVEKTYQR AKTSASTAGN VEASGKFRFK RQQFARRNYK DIARDPAEPF
RTRIRNGQRV AENLFLGLTC GHGMRLYRIA AMFIFFPVLP ALLYTFGGPP FRTGAGQVHS
IADFISMGGI ETFAANLHFS YITFLTIGYG NVVAEGNLGL VLVSMEAYAS VVLGGLFIYV
LIKRSEL
|
|---|
| |