Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2056 |
Symbol | |
ID | 8384350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 2083576 |
End bp | 2085693 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644973125 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_003130956 |
Protein GI | 257053123 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [S] Function unknown [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.9756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTATG CATATTTGCA TGACACCGAA TTGACCCCTG CCCCTCCCTC AGGTGTTTTC AGCTGGTTAC TTGGAATAGG CCATGTCGTA ATACTCCCTA TTCTAATATT TTACATATTG GGCGTAGTAG CCTATCGCCG TTTGTCAGAT TCATCGGAAC TCGACACACT CACGAAGTGG CCACGTCCAG GCCGCGACGC GGCAAACACC GCTGCAGCGC CGGATTGTCG TGCGGTTCAG CCCGATTCAG ACAGCGCCTG GCAGGCAGGC AGTCACGAGA CCACCGCACC AGTCGTCGCC GACGACAGAG TCGTGGCTGG ACGCGCCGAT GGGACTGTCA CGGCCAGAGA TAACTGGAGT GGCGAGCGAC TGTGGCGCAC CTCGATCGGA GACAGCATAC CCACGACGCC AGCCATTGAG TTTTCATCGG TCTACGTAGC CTCTGGGACA GCGTTGGTTG CACTTGGCCA ACAATCCGGT GACACCGAAT GGACACTTTC GCTCCCGAGT GATGCTGCCG GCACACCGGT GCCCCACGAG GATAGGCTGT ATGTGACCTG CGAAGATGGC ACCGTTCTCG CGGTCAACGC GAAAGGTGGG GCCGAGCAGT GGCAAGCGTC CGTTTCGGCA CCCGTCGCTA ACAGGCCAGC CGTTTCCGAC GATCAAGTCG TGGTGAGCAC GACAGAGTCG ACGGTGGCAG CCTTTGACAC TGAAAACGGA GACACCAACT GGGCGATCGA CGTACAAGGT AATCGCCTGT CGGCACCGAT TGTGGCCGAC GACACTGTGT ATGTCGCAGA CTGCGGTGGA ACACTTTACG CGCTCAACGC TGACAATGGC AACGTCATTT GGTCCGTAGA GACAGGTATT GCACATTTGA CCCACCTTGC TGCCACTGAC GGGTCGGTCT GGTTGGCTAG CCAGGAGGGT ACAATCGTCA GCGTTGCTAC CGCGGCCTAC GAACATACGT CACCCAAGCG GTTCGAGACA ACGGTGACTG GACTGGCAAT CGTTGATACG ACTCTGTACG TTGGCGGGAA GTCGAACGTC TGGGGATTAA GTACAAAGAA CAGCGAAGAA CGTTGGCAGC TGGCGCTTGA CAGGAAGGCG ACCGGGATTG CGCCGACAAG TGAAGCCCTC TACGTCGGGA CGGAGTCGGG ACTCACTGGC TATCAAGCCG AGTCCGGAGA CAATGAGTGG GGTGAGACGG GCACTGAGAC GAAACCAGAA GCGAAACCCG AGCGGACGGA TGAGGAGTCA GCGGTCTCCG AAGTCACTCA ACCCGATGCC AACGAGCCCC CGTCGACCTC AGATGGGAGT GCGGGAAAGG GTAGCGCCGA CAGGTTGGCC ACCGATATCA GACCCCTCAA CGAGCTAACG CTCCTTGCCG ACGATGGCTC ATTGGAAGTC TACCGTGGCC GGCACGCGGA GGAAGCGGAC GAGGTTCGCG TTCTCACGCC GTCCGATCCC ACAGAACCCG TTGCTGAGCG GTTCCAACGG GCAGTACTCG GCTGGGTGAA CGGGAGCTCC CATCGGAACG TAGTGACGAT TCACGACAGA GGGATGGAGC CACGCCCGTG GGTCGCAACC GAGTCCGATG CGGAATGGAC TACGTTAGCC GAGCCTCCGG GTTGGCTTGA CTTCGAGCAG ACGATTGGAA TCCTGACGGA CGCCGCGGAG GGGTTGCGCA ACGTCGCCCT GTACAACGTA TATCATCACA ATCTGTCTCC CCGGCACATC TGGGCCGGGC GGCAGGATGA CGAAGTAGTT GGGAAGGTAG ACGACTGGGG ACTTGACCGT GTCGTCCGAG AGGCGGCTGG TGAGACAGTC CTCACGTCGT ATACCGCCCC CGAACAGGTC AGCGATGCCT ACGGCCAGCC CGATGAAGCG ACGGACATCT ACGGGCTGGG AGCTGTCGCT TATTACGTCT TAACAGGCAC AGAGCCGGTG GAGGCCGAGC GGGATGCGAT CTTGGAAGGG GATATCACCC CGCCAAGCGA GGTCGCGGAG GTGCCAGCGG GGCTTGACGA GGTACTCTTG CGGGCGATGG CAACCGATCC GGCGGAACGC TACGATTCGA TGTATGCCTT CGGTCTGGCA CTCAACAACG CGCTATAG
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Protein sequence | MGYAYLHDTE LTPAPPSGVF SWLLGIGHVV ILPILIFYIL GVVAYRRLSD SSELDTLTKW PRPGRDAANT AAAPDCRAVQ PDSDSAWQAG SHETTAPVVA DDRVVAGRAD GTVTARDNWS GERLWRTSIG DSIPTTPAIE FSSVYVASGT ALVALGQQSG DTEWTLSLPS DAAGTPVPHE DRLYVTCEDG TVLAVNAKGG AEQWQASVSA PVANRPAVSD DQVVVSTTES TVAAFDTENG DTNWAIDVQG NRLSAPIVAD DTVYVADCGG TLYALNADNG NVIWSVETGI AHLTHLAATD GSVWLASQEG TIVSVATAAY EHTSPKRFET TVTGLAIVDT TLYVGGKSNV WGLSTKNSEE RWQLALDRKA TGIAPTSEAL YVGTESGLTG YQAESGDNEW GETGTETKPE AKPERTDEES AVSEVTQPDA NEPPSTSDGS AGKGSADRLA TDIRPLNELT LLADDGSLEV YRGRHAEEAD EVRVLTPSDP TEPVAERFQR AVLGWVNGSS HRNVVTIHDR GMEPRPWVAT ESDAEWTTLA EPPGWLDFEQ TIGILTDAAE GLRNVALYNV YHHNLSPRHI WAGRQDDEVV GKVDDWGLDR VVREAAGETV LTSYTAPEQV SDAYGQPDEA TDIYGLGAVA YYVLTGTEPV EAERDAILEG DITPPSEVAE VPAGLDEVLL RAMATDPAER YDSMYAFGLA LNNAL
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