Gene Huta_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2056 
Symbol 
ID8384350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2083576 
End bp2085693 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content60% 
IMG OID644973125 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_003130956 
Protein GI257053123 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[S] Function unknown
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase
[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.9756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTATG CATATTTGCA TGACACCGAA TTGACCCCTG CCCCTCCCTC AGGTGTTTTC 
AGCTGGTTAC TTGGAATAGG CCATGTCGTA ATACTCCCTA TTCTAATATT TTACATATTG
GGCGTAGTAG CCTATCGCCG TTTGTCAGAT TCATCGGAAC TCGACACACT CACGAAGTGG
CCACGTCCAG GCCGCGACGC GGCAAACACC GCTGCAGCGC CGGATTGTCG TGCGGTTCAG
CCCGATTCAG ACAGCGCCTG GCAGGCAGGC AGTCACGAGA CCACCGCACC AGTCGTCGCC
GACGACAGAG TCGTGGCTGG ACGCGCCGAT GGGACTGTCA CGGCCAGAGA TAACTGGAGT
GGCGAGCGAC TGTGGCGCAC CTCGATCGGA GACAGCATAC CCACGACGCC AGCCATTGAG
TTTTCATCGG TCTACGTAGC CTCTGGGACA GCGTTGGTTG CACTTGGCCA ACAATCCGGT
GACACCGAAT GGACACTTTC GCTCCCGAGT GATGCTGCCG GCACACCGGT GCCCCACGAG
GATAGGCTGT ATGTGACCTG CGAAGATGGC ACCGTTCTCG CGGTCAACGC GAAAGGTGGG
GCCGAGCAGT GGCAAGCGTC CGTTTCGGCA CCCGTCGCTA ACAGGCCAGC CGTTTCCGAC
GATCAAGTCG TGGTGAGCAC GACAGAGTCG ACGGTGGCAG CCTTTGACAC TGAAAACGGA
GACACCAACT GGGCGATCGA CGTACAAGGT AATCGCCTGT CGGCACCGAT TGTGGCCGAC
GACACTGTGT ATGTCGCAGA CTGCGGTGGA ACACTTTACG CGCTCAACGC TGACAATGGC
AACGTCATTT GGTCCGTAGA GACAGGTATT GCACATTTGA CCCACCTTGC TGCCACTGAC
GGGTCGGTCT GGTTGGCTAG CCAGGAGGGT ACAATCGTCA GCGTTGCTAC CGCGGCCTAC
GAACATACGT CACCCAAGCG GTTCGAGACA ACGGTGACTG GACTGGCAAT CGTTGATACG
ACTCTGTACG TTGGCGGGAA GTCGAACGTC TGGGGATTAA GTACAAAGAA CAGCGAAGAA
CGTTGGCAGC TGGCGCTTGA CAGGAAGGCG ACCGGGATTG CGCCGACAAG TGAAGCCCTC
TACGTCGGGA CGGAGTCGGG ACTCACTGGC TATCAAGCCG AGTCCGGAGA CAATGAGTGG
GGTGAGACGG GCACTGAGAC GAAACCAGAA GCGAAACCCG AGCGGACGGA TGAGGAGTCA
GCGGTCTCCG AAGTCACTCA ACCCGATGCC AACGAGCCCC CGTCGACCTC AGATGGGAGT
GCGGGAAAGG GTAGCGCCGA CAGGTTGGCC ACCGATATCA GACCCCTCAA CGAGCTAACG
CTCCTTGCCG ACGATGGCTC ATTGGAAGTC TACCGTGGCC GGCACGCGGA GGAAGCGGAC
GAGGTTCGCG TTCTCACGCC GTCCGATCCC ACAGAACCCG TTGCTGAGCG GTTCCAACGG
GCAGTACTCG GCTGGGTGAA CGGGAGCTCC CATCGGAACG TAGTGACGAT TCACGACAGA
GGGATGGAGC CACGCCCGTG GGTCGCAACC GAGTCCGATG CGGAATGGAC TACGTTAGCC
GAGCCTCCGG GTTGGCTTGA CTTCGAGCAG ACGATTGGAA TCCTGACGGA CGCCGCGGAG
GGGTTGCGCA ACGTCGCCCT GTACAACGTA TATCATCACA ATCTGTCTCC CCGGCACATC
TGGGCCGGGC GGCAGGATGA CGAAGTAGTT GGGAAGGTAG ACGACTGGGG ACTTGACCGT
GTCGTCCGAG AGGCGGCTGG TGAGACAGTC CTCACGTCGT ATACCGCCCC CGAACAGGTC
AGCGATGCCT ACGGCCAGCC CGATGAAGCG ACGGACATCT ACGGGCTGGG AGCTGTCGCT
TATTACGTCT TAACAGGCAC AGAGCCGGTG GAGGCCGAGC GGGATGCGAT CTTGGAAGGG
GATATCACCC CGCCAAGCGA GGTCGCGGAG GTGCCAGCGG GGCTTGACGA GGTACTCTTG
CGGGCGATGG CAACCGATCC GGCGGAACGC TACGATTCGA TGTATGCCTT CGGTCTGGCA
CTCAACAACG CGCTATAG
 
Protein sequence
MGYAYLHDTE LTPAPPSGVF SWLLGIGHVV ILPILIFYIL GVVAYRRLSD SSELDTLTKW 
PRPGRDAANT AAAPDCRAVQ PDSDSAWQAG SHETTAPVVA DDRVVAGRAD GTVTARDNWS
GERLWRTSIG DSIPTTPAIE FSSVYVASGT ALVALGQQSG DTEWTLSLPS DAAGTPVPHE
DRLYVTCEDG TVLAVNAKGG AEQWQASVSA PVANRPAVSD DQVVVSTTES TVAAFDTENG
DTNWAIDVQG NRLSAPIVAD DTVYVADCGG TLYALNADNG NVIWSVETGI AHLTHLAATD
GSVWLASQEG TIVSVATAAY EHTSPKRFET TVTGLAIVDT TLYVGGKSNV WGLSTKNSEE
RWQLALDRKA TGIAPTSEAL YVGTESGLTG YQAESGDNEW GETGTETKPE AKPERTDEES
AVSEVTQPDA NEPPSTSDGS AGKGSADRLA TDIRPLNELT LLADDGSLEV YRGRHAEEAD
EVRVLTPSDP TEPVAERFQR AVLGWVNGSS HRNVVTIHDR GMEPRPWVAT ESDAEWTTLA
EPPGWLDFEQ TIGILTDAAE GLRNVALYNV YHHNLSPRHI WAGRQDDEVV GKVDDWGLDR
VVREAAGETV LTSYTAPEQV SDAYGQPDEA TDIYGLGAVA YYVLTGTEPV EAERDAILEG
DITPPSEVAE VPAGLDEVLL RAMATDPAER YDSMYAFGLA LNNAL