Gene Huta_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2030 
Symbol 
ID8384324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp2047948 
End bp2048583 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content64% 
IMG OID644973100 
Productriboflavin synthase, alpha subunit 
Protein accessionYP_003130931 
Protein GI257053098 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCACGG GCATAATCGA GGACGTCGGA TCCGTCGAGG CCATCGACCG GCGGGCGAAC 
GCGCTCGTCC TGACAGTCCA CTCGACGGAA CTGACCGACC TCGAACTCGG CGACAGCGTC 
GCGGTCAACG GTCCGTGTCT CACGGTCGTC GAAATCGACG AATCGGCCGA GACGTTCACC 
GTCGAGGTGA CGCCCGAGAC CTACCGGCGG ACCAACCTTC GTGAGCTACA GCCGGGCAGT 
CCGGTCAACC TCGAATCGGC GCTACAGTTG AACGACGGCC TCGACGGCCA CCTCGTGACG 
GGTCACATCG ACGGGACCGG CGTCGTGACC GATCTCCGCC GCGAGGAGAA AGCACGGATC 
TACTCGATCC GACCGCCGGA GAAGTTGTTG CCCTACCTCG CCGAGAAGGG GTCGGTGGCG 
GTCGACGGCG TCAGCCTGAC CGTCGTCGAC GTCGATCGGA CCTTCAGCGT CTCGATCACC 
GATTACACGG AAGACGAGAC GATCCTCACG GAGACCGGCG TCGGCGACGA GGTCAACCTC 
GAAGTCGACG TGATCGCACG CTACGTCGAG CGGTTGGCCG GGGAGGCAGA CGGCGAGACG 
GACCTCATGA GCAAACTCGA AGCACTCAAC CAATGA
 
Protein sequence
MFTGIIEDVG SVEAIDRRAN ALVLTVHSTE LTDLELGDSV AVNGPCLTVV EIDESAETFT 
VEVTPETYRR TNLRELQPGS PVNLESALQL NDGLDGHLVT GHIDGTGVVT DLRREEKARI 
YSIRPPEKLL PYLAEKGSVA VDGVSLTVVD VDRTFSVSIT DYTEDETILT ETGVGDEVNL 
EVDVIARYVE RLAGEADGET DLMSKLEALN Q