| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2029 |
|---|
| Symbol | |
|---|
| ID | 8384323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 2046713 |
|---|
| End bp | 2047951 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644973099 |
|---|
| Product | GTP cyclohydrolase II |
|---|
| Protein accession | YP_003130930 |
|---|
| Protein GI | 257053097 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTCA TCGAATCGGA CCGGGATCGC TCGCGCTTCG ACGACATCGA GACGGCGATC
GACGCCATCG AGGACGGCGA GATGATCCTG TTGGTCGACG AGCAGAGTCG CGAGGACGAG
GGCGACCTGT ACGTGCCCGC GGAGGCGATC ACCCCCGAGC AGATGAATTT CATGCTCAAG
CACGGCCGTG GACTGGTCTG TGCGCCTGTC AGCCCCGAAA TCACGGACGA TCTGGGCCTC
GAACAGATGG TCCCCGCCTC CGAGAACACC GAGGAGATGA GTACCCGCTT CACCGTCTCG
GTCGACGCCG CCTCGACGGG GACGGGCATC TCGGCGTACG ATCGCGCCGA GACGGTCCAG
GCGCTGGTCG ATCCCGAGAC CGAACCGGCA GATCTCGACA AACCAGGACA CATCTTCCCC
CTGGAGGCCA AAGCCGACGG CGTGCTCGAC CGCGAGGGTC ACACCGAAGC GGCGGTCGAC
CTCGCCCGAA TCGCCGGCTA CCGGCCCGGC GGCGTGATCT GCGAGGTCGT CGACGACGAC
GGCACGATGG CCCGGGAGGA TCGGCTGCTG GAATTCGCCG ACGAACACGA GTTGCCGATC
GTAACCGTTG CCGATGTCCT CGAGTATCGC CACCTGACCG AGACGCTCGT CTCCCGGGAA
GTCGACACCC GGCTGCCGAC GGCGTTCGGT ACCTTCGACA TGTACGGGTA CGACTACCGC
GGCGAGACCC ACGTCGCGCT GGTCAACCTC GACGACGTCG ATCCCGAGAC CGACCGGCCG
CTGGTCCGGA TCCACTCGAA GTGTCTGACC GGCGACGCCT TGCACTCCCT GAAGTGTGAC
TGCGGGTTCC AGCTCGAAGA GACCATGCAA CGCATCAGCG ACGAGGGTGG CGTCCTGCTG
TACCTCGATC AGGAGGGACG CGGGATCGGC CTGCTCAACA AACTCAAGGC CTACGAGTTA
CAGGAGCACG GCTACGACAC CGTCGAGGCC AACGTCGAAC TCGGGTTCGA ACCCGACGAG
CGACGCTTCG ACGCGGCCGC CCAGATGCTC AGGGACATCG GGCTGGATCG CGTGCGTCTG
CTGACGAACA ACCCGCGGAA GGCCGCCGCG CTCGAACGGT TCGAGTTCGA CGTCGAAATC
GACTCCCTGG AGATCGAACC CAACCCCGAG AACGAGGCCT ATCTCGCGAC CAAAGCCGAA
AAGCTCGACC ATCAACTCGA CGTGTTCAAC TCCGACTGA
|
|---|
| Protein sequence | MTVIESDRDR SRFDDIETAI DAIEDGEMIL LVDEQSREDE GDLYVPAEAI TPEQMNFMLK
HGRGLVCAPV SPEITDDLGL EQMVPASENT EEMSTRFTVS VDAASTGTGI SAYDRAETVQ
ALVDPETEPA DLDKPGHIFP LEAKADGVLD REGHTEAAVD LARIAGYRPG GVICEVVDDD
GTMAREDRLL EFADEHELPI VTVADVLEYR HLTETLVSRE VDTRLPTAFG TFDMYGYDYR
GETHVALVNL DDVDPETDRP LVRIHSKCLT GDALHSLKCD CGFQLEETMQ RISDEGGVLL
YLDQEGRGIG LLNKLKAYEL QEHGYDTVEA NVELGFEPDE RRFDAAAQML RDIGLDRVRL
LTNNPRKAAA LERFEFDVEI DSLEIEPNPE NEAYLATKAE KLDHQLDVFN SD
|
|---|
| |