Gene Huta_2021 details

Gene Information

• Locus tag: Huta_2021
• ID: 8384315
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2041185
• End bp: 2041679
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644973091
• Product: CBS domain containing membrane protein
• Protein accession: YP_003130922
• Protein GI: 257053089
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3448] CBS-domain-containing membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGTG CCCGCGACGT GATGACCGAG GACGTCGAGA CGGTCGCCCC TGACGACGAG 
ATCAGCGAAG TCCTCACCCG ACTGGCCCGT GCGGACTTCA ACGGGTTTCC GGTCGTCGAG 
GACGGGGCCG TCGTCGGCGT CGTCACCGAG GAGGACCTCG TCGACATGTT CCAGCCCTCG 
AACCGAGTGC TGTGGATTCC GATCGGCTTT CCGCCGTTCC TGGAGAGTCG GACTTACGGC 
TTCGACCTCT CGTGGGACGA CCTCGATGTC GGGATCGACA TGGTCAAAAG CGCCCGCAAG 
CCGATCAGCA CTGTCATGAC CGAGGACGTG GTGACTGTCG ATCCCGATGC TGATCTGGAC 
GAACTCCTCG GACTGCTGGC CGACACGTCC CGGAACATCA ACCGGCTACC CGTTCTCGAC 
GACGGCCAGT TGGTCGGGAT CGTCACGCGT CAGGATCTCC TGACGGCCCT TGACGACGAA 
CGAAACGAGC GCTGA 

 

Protein sequence

MIRARDVMTE DVETVAPDDE ISEVLTRLAR ADFNGFPVVE DGAVVGVVTE EDLVDMFQPS 
NRVLWIPIGF PPFLESRTYG FDLSWDDLDV GIDMVKSARK PISTVMTEDV VTVDPDADLD 
ELLGLLADTS RNINRLPVLD DGQLVGIVTR QDLLTALDDE RNER