Gene Huta_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2020 
Symbol 
ID8384314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp2040459 
End bp2041085 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content63% 
IMG OID644973090 
Productprotein of unknown function DUF502 
Protein accessionYP_003130921 
Protein GI257053088 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCGA CGTGGAAGCG CGATTTCGCC AGCGGACTGA TCGTCATCAC GCCGCTTTTG 
GTCACCGTGA TGGTCCTCCT GTGGCTGTAC AACCGCCTGG AGGGGATTCC ACTGCCGGTC 
GAACCCGCAC CGCTTCGGGT CGGGTTGACG ATCGTCGTGT TCATCCTGCT GGTGTTCGCC 
GTCGGGTATC TGATGCGGAC CGCCGTCGGC TCGATCGTCG AGGACGCGAT CGACGATCTC 
ATGAACCAGC TGCCGGGGCT GCGCGTCGTC TACAACGCCT CGAAGATGGC AGCCGAAACT 
GCGCTCTCGG GCACCGACGA ACTCCAGGCA CCGGTCAAGC TCGAGACCTG GGACGGGATG 
CGGATGACCG CGTTTCTGAC CGGCAAAACC ACCGAAGACG GACGGGACGT GCTGTTTCTC 
CCGACCGCAC CGAACATCAC GACGGGGTTC GTCGTCGAAG TCGAACCCGA CCGCTATACG 
GAGATCGACG AGCGCGTCGA GGACGCACTG ACCCGGATTC TCAGTGCCGG CTTCGGCGAG 
AGCGACGAAA AATCGATTCA GGTCGACGTC GAAGATGTCG TCAGTGAAGT TGGCGGGAGT 
CCCGACGGAG AGCGCGACGC CGACTGA
 
Protein sequence
MASTWKRDFA SGLIVITPLL VTVMVLLWLY NRLEGIPLPV EPAPLRVGLT IVVFILLVFA 
VGYLMRTAVG SIVEDAIDDL MNQLPGLRVV YNASKMAAET ALSGTDELQA PVKLETWDGM 
RMTAFLTGKT TEDGRDVLFL PTAPNITTGF VVEVEPDRYT EIDERVEDAL TRILSAGFGE 
SDEKSIQVDV EDVVSEVGGS PDGERDAD