Gene Huta_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2013 
Symbol 
ID8384307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2035205 
End bp2036239 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content66% 
IMG OID644973083 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003130914 
Protein GI257053081 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.238084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACGG CAGTCCTCAC TGAAGATCTC GAGTTCGAGT TCGAGGAGCG CGAGCGACCG 
ACGCCGGCGA GCGACGAGGT GCTCGTCGAG ATGACCGACG TCGGGATCTG CAAGTCCGAC
GTCCACTACT GGGAGCACGG CAAGATCGGC GAGTACGTCG TCGAGGACCC GCTCCTGCTT
GGCCACGAGA GCGCGGGCGT CATTGCCGCG GTCGGCGACG ACGTCGAGGG ACTCGATATC
GGCGACCGCG TCGCACTCGA ACCGGGCATC GTCTGTGGCA CGTGCGAGCA CTGTCGTCGC
GGCGAGTACA ACCTCTGTCC GAACGTCGAC TTCATGGCCA CGCCGCCCTT TGACGGCGCG
TTCGCGGAGT ACGTCGTCTG GCCGGCCAAT CTCGCACACG TCCTCCCCGA CAGTGTCTCC
CAGGTCGAGG GCGCGCTGTG TGAACCCTTC GCGGTCGGTC TCCACGCGAC CCGTCGCGGG
AGCGTCGGCC ATGGCGATAC CGTCGCAATC TTGGGCGGCG GGACCGTCGG CTCGGTCACG
ATGGAGGCCG CCAGGGCCGC AGGCGCGACG GACATCATCG TCGCGGACAT CGTCGACAGC
AAGCTTGAAC GTGCGGAGGA ACACGGCGCG GACGCGACGG TCAACGTTCG CGAGGGTGAC
TTCGCCGCGA CGGTCGATGA GTACACCGAC GGCCGGGGAG CCGACGTGGT CTTCGAGGCG
ACGGATTCCG AACCCGATGT CGAAGCGCTG ATTGACGCGG CCCGCCGCGG TGGAACGGTC
GTCATGATCG GTCTCGCCGA CGAGGCGACC GTCGAGGTCG ACGCCTTAGA GATCATCACC
AACGAACTCG ACGTGCTGGG TTCGTTCCGG GACGCCAACC GCTACGGCCC GGCGATCGAC
CTGCTGGCCG AGGGTGCCGC CGACATCGAG TGGATCGCCG ACTTCACCGA GCCGCTTGCC
AACGTCAAGG AAGCCTTCGA GCGCGCCCAC GATGACGACG ATGCGATCAA GGGCATGATC
TCGATCGGGG AGTAG
 
Protein sequence
MQTAVLTEDL EFEFEERERP TPASDEVLVE MTDVGICKSD VHYWEHGKIG EYVVEDPLLL 
GHESAGVIAA VGDDVEGLDI GDRVALEPGI VCGTCEHCRR GEYNLCPNVD FMATPPFDGA
FAEYVVWPAN LAHVLPDSVS QVEGALCEPF AVGLHATRRG SVGHGDTVAI LGGGTVGSVT
MEAARAAGAT DIIVADIVDS KLERAEEHGA DATVNVREGD FAATVDEYTD GRGADVVFEA
TDSEPDVEAL IDAARRGGTV VMIGLADEAT VEVDALEIIT NELDVLGSFR DANRYGPAID
LLAEGAADIE WIADFTEPLA NVKEAFERAH DDDDAIKGMI SIGE