Gene Huta_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1999 
Symbol 
ID8384293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp2021707 
End bp2022717 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content66% 
IMG OID644973069 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003130900 
Protein GI257053067 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.131571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGCG AGTCGCTGTA CTTCACCGGT CCCGAAGCGC TCGACCTGCG CGAACGATCG 
GTCGAGGTCT CGGCCGATGA GGTGCTCGTC GAGACGCACG TCTCGGCCAT CAGTCCCGGG 
ACAGAACTGC TTATCTATCA CGGCGAGGCC CCGCGTGATC TCCCGGCCGA CGAAACCCTC 
GACGCGCTGG ATGGCGACCT CTCGTATCCG TTGCGATACG GCTACGCCGC CGTCGGCGAG 
GTGATCGAGA CCGGATCGGC CGTTGATCCG TCCTGGCAGG GTCGAGAGGT CTTCGGCTTC 
AACCCACACG AAACCCGATT CAGCGCCGAG CCCTCGACCC TCATTCCGGT CCCTGACGGG 
ACTGTTGCCG AGGAGATGGT CATGTATCCG ACCGTCGAGA CGGCGACGAC GCTCGTCCTC 
GATGGCGGGC CGCGAGTCGG CGAGCGGGTG GTCGTCTTCG GTGCCGGCGC GATCGGGCTG 
TGTGTGATCG GGTTACTGGC GTCGTTTCCG CTGTCGGAAC TGGTTGTCGT CGACCCGCTT 
TCGGCGCGCC GCGAACGTGC CCGGCAACTG GGTGCCGATA CGACCCTGGC ACCGGATGAC 
CTGACGGCAA ATCGCTGGGA CGATGCGGCT GGGCCGGACG GCGCCGACCT GGTGTATGAA 
CTCTCGGGTA CCCCGTCGGC ACTGGACGAC GCCCTCGCGG TTGCGGGCTA CGATAGTCGG 
ATCGTCGTCG GCTCCTGGTA CGGCACCAAG TCACCGACAC TCGACCTCGG CGGGGATTTC 
CACCGCGACC GCGTCTCGAT CGAGTCCAGC CAGGTGAGTA CGATCGACCC GGATCGTCGC 
GGCCGCTGGT CGTTCGATCG CCGCACCGAA GTCACACTCG ACAATCTGGC GTCGCTCCCG 
GTCGAATCCC TGGTCACGCA CCGGATCCCG TTCGAAGAGG CCCCCGACGC GTACCGACTC 
CTCGACGACC AGCCCGAAGA CGCCCTACAG GTCCTGCTGA CGTACCACTG A
 
Protein sequence
MTGESLYFTG PEALDLRERS VEVSADEVLV ETHVSAISPG TELLIYHGEA PRDLPADETL 
DALDGDLSYP LRYGYAAVGE VIETGSAVDP SWQGREVFGF NPHETRFSAE PSTLIPVPDG 
TVAEEMVMYP TVETATTLVL DGGPRVGERV VVFGAGAIGL CVIGLLASFP LSELVVVDPL 
SARRERARQL GADTTLAPDD LTANRWDDAA GPDGADLVYE LSGTPSALDD ALAVAGYDSR 
IVVGSWYGTK SPTLDLGGDF HRDRVSIESS QVSTIDPDRR GRWSFDRRTE VTLDNLASLP 
VESLVTHRIP FEEAPDAYRL LDDQPEDALQ VLLTYH