Gene Huta_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1981 
Symbol 
ID8384275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2005888 
End bp2006349 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content68% 
IMG OID644973051 
Product30S ribosomal protein S19e 
Protein accessionYP_003130882 
Protein GI257053049 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2238] Ribosomal protein S19E (S16A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.623117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGC TCTACGATGT CCCGGCCGAG GACCTCATCG AGGCCGTGGC CGAACAACTC 
GCCGAGGATA GTGCGATCGA AGCGCCCGAA TGGCTCACCT TCACCACCAC CGGCACCGGC
CGCGAACTCG CCCCCGAGCA GGAGGACTTC TGGGAGACCC GCGCCGCGAG CCTGCTCCGG
AAGGTCGCCG TCGACAGCCC GGTCGGCGTC GGCACGCTCG CGACCGCCTA CGGCGGAACC
AAACAGGGGA CCAACCGCTA CCAGGTCCGT CCGAAACACC AGGCCGACGG GAGCCGCAAC
ATCATCCGGA CGGCGCTCCA GCAACTCGAA GACGCGGGCT ACGTCTCGAC CGCCGAGGGC
GAGGGCCGAC GGATCACTGC CGACGGACAG GCTCTCCTTG ACGAGACGGC CGAGGAGGTT
ATCGAGGACC TCGACCGACC GGAACTCGAA CGCTACGCCT AG
 
Protein sequence
MTTLYDVPAE DLIEAVAEQL AEDSAIEAPE WLTFTTTGTG RELAPEQEDF WETRAASLLR 
KVAVDSPVGV GTLATAYGGT KQGTNRYQVR PKHQADGSRN IIRTALQQLE DAGYVSTAEG
EGRRITADGQ ALLDETAEEV IEDLDRPELE RYA