Gene Huta_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1966 
Symbol 
ID8384260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1990373 
End bp1990705 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content65% 
IMG OID644973036 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003130867 
Protein GI257053034 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.290809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG ACCGACTCGC GGACCTCGCG GGATCGACAC TCGAACTCGA CGACCTCATC 
GACTACCAGG ACGGGGCGAT CGTCAGCCGG ACGCTGGTCG ACCGGGAGGC GGCGACGCTG
ACGATCTTCG CCTGTGACGA GGACCAGACG ATCAGCGAGC ACACCGCGCC CCACGAGGCA
CTCCTGCAGG TGCTGGACGG TACGGCTGAG GTCACGATCG ACGGGACTGA CTACGAACTG
CAAGCGGGCG AGTCGATTGT CTTCCCCGCC GACACGCCCC ACGCGGTCGC CGCCGAGGAG
CGCTTCAAAA TGCTGCTGAC GATGATTCGG TAG
 
Protein sequence
MSDDRLADLA GSTLELDDLI DYQDGAIVSR TLVDREAATL TIFACDEDQT ISEHTAPHEA 
LLQVLDGTAE VTIDGTDYEL QAGESIVFPA DTPHAVAAEE RFKMLLTMIR