| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1962 |
|---|
| Symbol | |
|---|
| ID | 8384255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 1986598 |
|---|
| End bp | 1987833 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644973031 |
|---|
| Product | Endo-1,4-beta-xylanase |
|---|
| Protein accession | YP_003130863 |
|---|
| Protein GI | 257053030 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.634854 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGAC ATAACATCGA AGACGCGGCG GACGAATCGA GCGACAACGG CCGAATCGGC
CGGTTCGATC GGCGGAGCTA TCTGAAAGGA GCGGCCGCGA CAGTGGCGAC AGGACTCGGC
ATTGGATCCA TCGCGAGTCC GGCCGCGGCC ATCACCTCGA ACCAGACTGG CAACGACAGC
GGGTATTACT ACTCCTTCTG GACCAACGCC GAGGGCACAG TCGAGATGAC GCTGGGAGAC
GGCGGCAATT ACAGTGTCGA CTGGTCGGAC ACAGGCAACT TCGTCTGTGG CAAAGGTTGG
CAGACGGGTG GCCGCCGTGA CGTCGATTAC ACGGCCAACT ACAACCCGTC GGGTAACTCT
TACCTGTGTC TATACGGGTG GACGACGGAC CCGCTGGTGG AGTACTACAT CATCGAGGAT
TACGGCAGCT ACAAGCCGGG CGACTCCTAT CAGGGGACCC ATACTACCAA CGGGTCGACC
TACGAGATCT ACACGTCCGA GCGGGTGAAC AAGCCCTCGA TCGAGGGCAA TGCAACGTTC
ACGCAGTACT GGTCCGTTCG GCAGAACTCC CGGACGAGCG GGACGATCAC GACCGGCAAT
CATTTCGATG CCTGGGAGAA CCACGGGCTG CCCATGGGCA ACCACGACTA CATGATCCTG
GCCACCGAGG GTTACCAGAG CAGCGGCTCC TCGGAGGTCT GGGTCGGTGC CGACGGTAGC
GGCGGTAGCG GCGGTGGCGG TGGTGGCGGT GGCGGAGGCG GCGGTTCCGG CGGAGGCGGC
GGTGGTTCGA GTGGCTCCTC GAATCCGCCG GCTAGCGGCA CCTACAGCAT CCAGAACGTC
AACAGCGGGA AGGGCATGGA CGTCGCCGGG CAGTCGACGT CGGACGGTGC GAACGTCCAG
CAGTACAGCT ACTGGGGCGG CGAGAACCAG CAGTGGAACG TCGAGGATAC GGGCGGCGGG
CAGTTCCGGA TCCAGAACGT CAACAGCGGG AAAGTGCTCG ACGTCGCCAA CCAGTCCACC
GAGGACGGTG CGAACGTCCA TCAGTACTCG GACGGCGGCG GCGACAACCA GCGCTTCTAC
CTGAACGACC AGGGCGGCGG CCAGTATCAT ATCCAGCCAG TCCACAGCCA GAAGGCTGTC
GAGATTACGA GTTCCTCGAC ATCGGATGGT GCGAACGTCC AGCAGTACGA CTGGCACGGC
GGTAACAACC AACTCTGGAC GTTCGAGTCG GTCTAG
|
|---|
| Protein sequence | MGRHNIEDAA DESSDNGRIG RFDRRSYLKG AAATVATGLG IGSIASPAAA ITSNQTGNDS
GYYYSFWTNA EGTVEMTLGD GGNYSVDWSD TGNFVCGKGW QTGGRRDVDY TANYNPSGNS
YLCLYGWTTD PLVEYYIIED YGSYKPGDSY QGTHTTNGST YEIYTSERVN KPSIEGNATF
TQYWSVRQNS RTSGTITTGN HFDAWENHGL PMGNHDYMIL ATEGYQSSGS SEVWVGADGS
GGSGGGGGGG GGGGGSGGGG GGSSGSSNPP ASGTYSIQNV NSGKGMDVAG QSTSDGANVQ
QYSYWGGENQ QWNVEDTGGG QFRIQNVNSG KVLDVANQST EDGANVHQYS DGGGDNQRFY
LNDQGGGQYH IQPVHSQKAV EITSSSTSDG ANVQQYDWHG GNNQLWTFES V
|
|---|
| |