| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1958 |
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| Symbol | |
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| ID | 8384251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 1981408 |
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| End bp | 1982649 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644973027 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003130859 |
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| Protein GI | 257053026 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.8831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTGGC GAGAAGGGGT TCGGATGGCA GTGCGAGCGA TCGCCGGCCA TCGGCTCCGG
TCGGCGTTGA CGGTCGTCGG CATCGTCATC GGCATCGCGA CGGTGATCGC GTTCGCGAGT
TTCGGTGCGA GCGTCCAGAC CGACGTCGTG AGCGAGTTCC AGTCGACATC GGCGAGCGAG
ATTTACGTCG CCTCCGGTGG CGGATTCCTG GCCGGTGGCG GGCCACCCGG GAGCGGGATC
GGCCTCACGA CCCCGGCCGT CACGACATAC GATCTCGAAC AGCTCCGTGC GATCGACGGC
ACGCGGACCG TGATCCCACG GGGGTCGGTG CCCGTCTCGT CGTTGACATA CGCGAACCAG
ACGGTCACGC CCGGAAGCCT GACGGCGACG AGTCGCGGGG CGTTGGCGGG CACGATCGTC
GAGGGCCGGG TCTTCGAGTC CGGCACGAAC GAGATCGTCC TCAACGAGAT CGCCGCCGCG
CAGTTCGAGC CGAACGTAAC CGTCGGTGAC ACGGTCGAAC TCCTCCGAGA GGGCACAACC
TCGCTGACGG TCGTCGGCAT CACCACCGGG GCTCGCGGTG GGTTCACCGC ACTCTCGCCG
CCCGGACCGG AATTCTACGT TCCGGTCGAC CCACACTACC GGACGACCCA GGAATCGCCG
ACCCTCGGCG TCGAGCAGCG GGCGTACTCA CAAGTGACGA TCGTGGCCGA TGCCGGCCGC
GTCTCGGAGA CCCGCGACGC GATCGAGACA TACATTCAGA CGGAGTCGGA TGCGAGACAA
CTCGCGGGCG ACGGTAGCCA GGTGACCGTC GAGTCGACCG AGGACGTCGT CGGCGGCATC
CAGGCCGTGC TTCAGGACAT CACGCGACTC ATCACCGGGA TCGGCGTGCT CGCGCTCGTG
GTCGGCGCGT TCGGCATCGC CAACATCATG CTCGTCAGCG TGACCGAGCG CACGAAGGAG
ATCGGGATCA TGAAGTCGAT GGGCGCGACC AACCGGGAGA TCGTCGGGCT GTTCCTCGTC
GAGTCCGTCC TGCTGGGTTC GCTCGGGGCC GTGATCGGTA TCCCGCTCGG ACTCGGCGTC
GGGTACGCGG GTGCGACCTA CGCCGAGGTC GGGTTCACGA TCCCCGTCGA GTGGGTCGCC
ATCGCCATCG CGATGGGGAT CGGTATCGGC GTGATCGCCG GGCTGTACCC GGCCTGGCGG
GCCGCTCGCG TCGATCCGAT CGAAGCCCTG CGATACGAGT GA
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| Protein sequence | MDWREGVRMA VRAIAGHRLR SALTVVGIVI GIATVIAFAS FGASVQTDVV SEFQSTSASE
IYVASGGGFL AGGGPPGSGI GLTTPAVTTY DLEQLRAIDG TRTVIPRGSV PVSSLTYANQ
TVTPGSLTAT SRGALAGTIV EGRVFESGTN EIVLNEIAAA QFEPNVTVGD TVELLREGTT
SLTVVGITTG ARGGFTALSP PGPEFYVPVD PHYRTTQESP TLGVEQRAYS QVTIVADAGR
VSETRDAIET YIQTESDARQ LAGDGSQVTV ESTEDVVGGI QAVLQDITRL ITGIGVLALV
VGAFGIANIM LVSVTERTKE IGIMKSMGAT NREIVGLFLV ESVLLGSLGA VIGIPLGLGV
GYAGATYAEV GFTIPVEWVA IAIAMGIGIG VIAGLYPAWR AARVDPIEAL RYE
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