Gene Huta_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1929 
SymbolalaS 
ID8384221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1953799 
End bp1956579 
Gene Length2781 bp 
Protein Length926 aa 
Translation table11 
GC content66% 
IMG OID644972998 
Productalanyl-tRNA synthetase 
Protein accessionYP_003130831 
Protein GI257052998 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID[TIGR00344] alanine--tRNA ligase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATC TCGAGGAGGA ATACCGGCTC GAATACTTCG AGGAGCACGG GTTCCATCGC 
AAGGAGTGTA TGGAGTGTGG GGATCACTTC TGGACGCTCG ACGGGGCGCG GGAAACCTGC
GGTGAACCGC CCTGTGACGA GTACAGCTTT ATCGACGATC CCGGATTCGA CGAGGCATTC
GAACTCGGCG AGATGCGCGA ACAGTTTCTC TCCTTTTTCG AGGAGCACGA TCACGAGCGC
ATCGACCCCT ATCCCGTCGC GGCCAACCGC TGGCGGGAGG ACGTCCTCCT GACCCAGGCG
TCGATCTACG ACTTTCAGCC ACACGTCACT AGCGGCGCGT CGCCGCCGCC GGCGAACCCA
CTCGCCGTGA GCCAGCCCTG CATTCGGATG CAGGACATCG ACAACGTCGG CGTCACCGGC
CGACACACCA TGGCCTTCGA GATGATGGGC CATCACGCGT TCAACGCTGA CGAGGGGACC
GACTACGCCT ACGAGGGCGA GGTCTACTGG AAGGACGAGT GCGTCGAGTA CTGCATGGAC
TTACTCGCCG AAGTCGGTGC CGACCGCGAG GCTGTGACGC TGATAGAGGA CCCCTGGGTC
GGCGGCGGCA ACGCCGGACC CGCCTTCGAG GTGATCTACG AGGGCGCGGA ACTCGCGACG
CTCGTGTTCA TGCAGTTCGA GCGCGACCCG GACGGCGATT TCGAGATGAA GGACGGCAAC
ACCTACAGCC GGATGGATCG CCGGGTCATC GACACCGGCT ACGGGCTCGA ACGCTGGACC
TGGATGTCCC AGGGCACGCC GACGGTCTAC GAGGCCGTTT ACCCCGACAT GATCGACTTC
CTGACGGACA ATGCGGGGAT CGATCATACT GCCGACGAGG AGGAGATCGT CCACAAAGCG
GCGAAGCTCT CCGGTCGGAT GGATATCGAC GAGGCCGAGG ACGTCGAGGC TGCCCGCGAC
GACATCGCCG CGGAGATCGG CGTCGCGACC GACCGCCTCC GCGAACTCGT CGAACCCCTC
GAATCCATCT ACGCGATCGC CGACCACAGC CGGACACTCG CGTACATGCT CGGCGACGGG
ATCGTACCGA GTAACGTCGG CACGGGCTAT CTCGCGCGGA TGGTATTGCG GCGGACGAAA
CGCCTGGTCG ACGAGGTCGG CGTCGACGCC CCGTTGGACG AACTCGTCGA CATGCAGGCC
GAACGGCTTG GGTACGACAA CCGCGATACG ATCCGGGACA TCGTCCGCAC GGAGGTCGAG
AAGTATCGCG AGACGCTCGA CCGCGGCCAT CGACGCGTCG AGCAGTTGGC CGAGGAGTAC
GCCGACTCCG GCGACCCGAT TCCCGCCGAC GAACTTGTCG AACTCTATGA CAGCCACGGG
ATGCAGCCCG AGACAGTCGA ACAGATCGCC GCCGATCGTG GCGTCGCTGT CGAGACGCCC
GAGGACTTCT ATTCACTGGT TGCCGAGCGC CACGAGGACG CCGAACGCGC CGGGTCGACC
GAGGAAAGCG ACACGGACGA GCGTCTCGCC GACCTCCCCG AGACCGAGAA ACTCTACTAC
GACGACCAGA CTCGCACCGA GTTCGAGGCG GTCGTTCTCG ACGTCTTCGA GCGTGCGGAC
GGGTACGACG TGGTGCTCGA TCAGACGATG TTCTACCCGG AAGGCGGGGG CCAGCCCCCG
GACCAGGGGA CGCTCTCGAC GGACGACGAG ACGGTCGAGG TGACCGACGT CCAGATCCAG
GACGGTGTCA TCTTACACCG GACAGATGCC GACCCGGGGA CGGGCGACTT CGTTCGCGGT
CAGGTCGATG GACGGCGGCG ACGACGGCTG ATGGCCCATC ACACGGCCAC CCACATCGTC
GTTCACGCCG CCCGGCAGGT TCTCGGCGAC CACATCCGCC AGGCCGGCGC ACAGAAGGGA
ACTGACTCGG CACGCATCGA CGTCCGTCAC TACGAACCGG TCTCTCGCGC GGCGGTCAAG
GAGATCGAGC GGGTCGCCAA CGATATCGTC ACCGACAACG CCCAGGTCAC CCAGGAGTGG
CCAGATCGCC ACGAGGCCGA AGCCGAGTAC GGGTTCGATC TCTACCAGGG CGGGATCCCG
GCCGGCGAGC AGATCCGCCT GATCCACGTC GAGGACGACG TCCAGGCCTG TGGCGGGACC
CACGTCTCGC GAACGGGCGA AGTCGGGGCG ATCAAAATCC GCTCGACGGA ACGCATCCAG
GACGGCGTCG TCAGGCTGAC GTTCGCCGCC GGCGAGGCCG CCATCGAAGC GACCCAGGCG
ACCGAGGACG CCCTCTACGA GGCGGCCGAA GCGTTCGACG TGGATCCGCA GGACGTCCCG
GAGACGGCCG AACGCTTCTT CGCGGAGTGG AAAGAACGCG GCAAGGAGAT CGAAGCGCTC
CGGGCTGAAC TCGCCGAGGT TCGCGCATCG GGCGCAAGCG AGGGCGAGGA AGTCGATCTC
GACGGGACGA CGGCGGTCGT CCAGCGCGTC GACGGCGAGA TGGACGAGTT ACGGGCGACG
GCCAACGCGA TCGCCGATTC GGGGTCGGTG GCGGTCGTCG GTTCGGCGGC CGACGGCGCG
CAGTTCGTCG TGGCCGCACC CGAGGGTAGC GGTGTCGACG CTGGTTCGGT CGTGAGTGAA
CTCGCCGATC GCGTCGGCGG CGGTGGCGGC GGTCCCTCGG ACTTCGCCCA GGGTGGAGGG
CCGGACGCCG ACGCCCTCGA TGCGGCACTC GACGCTGCGC CGGACGTCCT GCGGCAGGTC
ATGCGTCCTT CGGACCGCTG A
 
Protein sequence
MSDLEEEYRL EYFEEHGFHR KECMECGDHF WTLDGARETC GEPPCDEYSF IDDPGFDEAF 
ELGEMREQFL SFFEEHDHER IDPYPVAANR WREDVLLTQA SIYDFQPHVT SGASPPPANP
LAVSQPCIRM QDIDNVGVTG RHTMAFEMMG HHAFNADEGT DYAYEGEVYW KDECVEYCMD
LLAEVGADRE AVTLIEDPWV GGGNAGPAFE VIYEGAELAT LVFMQFERDP DGDFEMKDGN
TYSRMDRRVI DTGYGLERWT WMSQGTPTVY EAVYPDMIDF LTDNAGIDHT ADEEEIVHKA
AKLSGRMDID EAEDVEAARD DIAAEIGVAT DRLRELVEPL ESIYAIADHS RTLAYMLGDG
IVPSNVGTGY LARMVLRRTK RLVDEVGVDA PLDELVDMQA ERLGYDNRDT IRDIVRTEVE
KYRETLDRGH RRVEQLAEEY ADSGDPIPAD ELVELYDSHG MQPETVEQIA ADRGVAVETP
EDFYSLVAER HEDAERAGST EESDTDERLA DLPETEKLYY DDQTRTEFEA VVLDVFERAD
GYDVVLDQTM FYPEGGGQPP DQGTLSTDDE TVEVTDVQIQ DGVILHRTDA DPGTGDFVRG
QVDGRRRRRL MAHHTATHIV VHAARQVLGD HIRQAGAQKG TDSARIDVRH YEPVSRAAVK
EIERVANDIV TDNAQVTQEW PDRHEAEAEY GFDLYQGGIP AGEQIRLIHV EDDVQACGGT
HVSRTGEVGA IKIRSTERIQ DGVVRLTFAA GEAAIEATQA TEDALYEAAE AFDVDPQDVP
ETAERFFAEW KERGKEIEAL RAELAEVRAS GASEGEEVDL DGTTAVVQRV DGEMDELRAT
ANAIADSGSV AVVGSAADGA QFVVAAPEGS GVDAGSVVSE LADRVGGGGG GPSDFAQGGG
PDADALDAAL DAAPDVLRQV MRPSDR