| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1921 |
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| Symbol | |
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| ID | 8384212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 1943710 |
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| End bp | 1946589 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644972989 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003130823 |
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| Protein GI | 257052990 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGC CCACGCCGAA CGCCCGGCAG CGCGAATTGA TTGAGGCGAT CGAGGGGATT
CACGTCGTCG ACGCCGGCGC GGGGACGGGC AAGACGTTCG CGATCACGCG TCGGTATGCG
AACCTACTGA GTGAGGGGTA CGAGCCTGAC GACGTGCTGC TGGTCACGTT CACGAACAAC
GCCGCCACCG AGATGAAAGA GCGCGTCGTC GCGCGGTGTG ACTACTCGAT GTCTGCGCTC
CGGGACGCAC CGATCAGCAC GTTCCACAGC TTCTGTCACG ACCTGCTCCT CGAATACGGG
GCCGACGCGC CCTCGTACCT CGGCATCGAC GACCAGATCA CCCAATCGAC GCAGCTGCTC
GAAAACGAGG TCATCGAGGC CGATCGCTTT CGGACCTTCC TCTCGCAGTT CGTCGACGCC
CATCCCGAAC ACGAGGCCGT GTTCCGGGTG CTCAACGATC CGACCGCCCT GCTCGAGTTG
ATCAGGGAAC TCGCCGCGAA GGGCGTCTTC CCCACTGTTG ACGGGTGGTA TCGCGATGGT
GCGGCCGCTC TGGACGGCGA TTTCGGGGCC TTCGAGGAGT TGTTTGCCGA GGCGAACGCA
CCAAACGAGG GAGCGAACGG AGCCACACAG TCGAACCTTC GCACCTCCCT GAGCGGGTTC
GAGCGCGATC GCTGCTTCCT CCCGGACGCC CCCAGCGAGG ACGAGTTGCG AGAGGGCTAT
CCCTCGATCG ACGACCGGTG GGCGGAGGAA GCGTTCGTGG AGGACCGCGA GGCGCTGACG
GAGTTCATCC ACGACGTGTA CGTCGAGTAT ATCCAGTTCG CGGTCCGGCG GAACTACCTC
AACTTCAGCT TCCTCCAGCT ATTCGCTTTC GTCCAATTGT GTGAGGATCA CGCGCTCCGG
GAGTCGATCG CCTTCGAGCA GGTGATGGTC GACGAGTTCC AGGACACCAG CGAGATCCAG
TTCAAGCTCA CACTCTTGCT CGCCGGGACC GACAACCTCT GTGTCGTTGG CGACTGGAAA
CAGTCGATCT ACGGGTTTCA GTACGCCGCC GTCGAGAACA TTCGCTCGTT CGAACGACGA
CTCCGGGCGT ACAAACGCGA ACTCAACGGC GAGCACGAAC GCGTCGCCTT CCCCATCGAG
GAGGTAACCA CGATCCCATT GCGGCGGAAC TACCGCTCGA CGCAGTCGAT TCTGGACCTC
TCGCGGCACG CCCTGACGGT GCCCGCGACG GGTAGCGAGT CGGTCGACCG AACCGTCGAG
GATATCGACG GCCTCGAGGC GGCGACCGAT CGGGACCACT CGACGATCGC GGCGTTCACG
AGTGCGAGCG AACACGAGGC GATCCTCGAT CGGATCGAGA CGATCGTCGG CAACGACGAC
TACGCGGTTG ACGAGAACGG CGACCTTCGC ACGCCACGCT ACGACGACAT CGCGGTCCTC
ACCCGAACGC GACGCTTCGG GCGGGAGTTA CAGACCACGG CCGACGAGTT CGGCGTCCCG
GTCGCCTACG AGGGCGGCGT GAAGCTCTTC GAGACCGATC AGGCGATCCT GCTGCTTGCA
TGGCTCCGGA TTCTCGCCGA CGAGGACTCG CGACGTGGCT GGGCGGTCGT CCTCGAACGG
GCGGGCTACA CGCTCGCAGA GGTCGAGCAG ATTCTCGACG AGCACACGTA TCCCGACGCG
ATGGACGCGT TTCGCGACCG ACTCGCGGCG ATGGAGTCGA TCGGTGCGAT CGCCCGGCAG
GTCTTCGAGC GCTACGGATT TGAGGACGCC TACGCGAGTT CGCTCGTCGC CCTCCTGCAG
GATGTCTCGG ACGGGACGAC GCGGAATCTC GGCGGGATGA TCCGCTTCAT CGAGCGGAGT
CTGGACGCTG AGGCGACCCA CGAGATCGAC GACAACCCGG GCGGGGACTC GATCACCGTC
CAGACGATCC ACGCGGCCAA GGGGCTGGAA CACCCGATCG TGATCGTCGC GAATATCAAC
CGGTACAGTT TCCCGCCAGC GGGCGGCGGC GACGATCGGA TTCGCTTCGA GGATCCGATC
GGCCTGCGCC AGACGAAACT GTCTTCGACA GCCCACGGTC AGCCCCACCT CTACGACAAC
TGGCGGTATC GCGTGCTGTC GGCGTGTCTG GGTCGTGACT ACGACGAGGA GCGCCGTCTG
CTCTACGTCG CGATGACGCG AGCGCAGGAT CACCTGCTCT TTTCGGCGGG CGCGGAGCCG
AGTCCGCTGT TCGAGAATTT GCCGCTGGAA CCCGAATCCG TCGAGCCGGA CCTTGAAGAG
TCCAGGATCG ATCGGACCGA ACAGACGCGA TTGCAGGTGT CGATCCCGGA GCCCGACGTG
CCGGCTGGCC AGTCACCACA CGCACTGATG GACGATCGCG TGTTCGAGGA TCGCGACGAC
GGTCGTGGGA TCGAGTTCGG GAATCGAGTT CACGAGTTCG CCGAACAGTA TGCCGACGGC
GAGGCTGTCG AGCCTGCGAG TGATGACGAA CGGCGAGTTC GAGACTTCAT CGATGAGCTG
GAGGGAGAGC TGCACGTCGA AGAGGACGCG TACCTGCCGG TGTCGGTCGG CGAGCAGGAA
GTGACTATCT CCGGCGTGAT CGACTTGCTT CACGTGACTG GCGATCGTGT CGAGATCGTC
GACTACAAGA CCGACCGTAC CCGGGACGCC GAAACCGAGT ATCGCAAACA GCTAAGCGTC
TACTATCATG TCGTCCGACA GCTGTATCCC GATCGAGAGA TTGAACCGAG TCTCTTTTAT
TCTGGTAAAG GTACTGTCGT AGCCATCGAT CCACTCTCGA TGGAATCTCT CTCGGATCTG
GTTAAAATCG AACGAGAATC AAATAGGAGC GATCAGGGAG AGAATCCTAC TATTCGATAG
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| Protein sequence | MTEPTPNARQ RELIEAIEGI HVVDAGAGTG KTFAITRRYA NLLSEGYEPD DVLLVTFTNN
AATEMKERVV ARCDYSMSAL RDAPISTFHS FCHDLLLEYG ADAPSYLGID DQITQSTQLL
ENEVIEADRF RTFLSQFVDA HPEHEAVFRV LNDPTALLEL IRELAAKGVF PTVDGWYRDG
AAALDGDFGA FEELFAEANA PNEGANGATQ SNLRTSLSGF ERDRCFLPDA PSEDELREGY
PSIDDRWAEE AFVEDREALT EFIHDVYVEY IQFAVRRNYL NFSFLQLFAF VQLCEDHALR
ESIAFEQVMV DEFQDTSEIQ FKLTLLLAGT DNLCVVGDWK QSIYGFQYAA VENIRSFERR
LRAYKRELNG EHERVAFPIE EVTTIPLRRN YRSTQSILDL SRHALTVPAT GSESVDRTVE
DIDGLEAATD RDHSTIAAFT SASEHEAILD RIETIVGNDD YAVDENGDLR TPRYDDIAVL
TRTRRFGREL QTTADEFGVP VAYEGGVKLF ETDQAILLLA WLRILADEDS RRGWAVVLER
AGYTLAEVEQ ILDEHTYPDA MDAFRDRLAA MESIGAIARQ VFERYGFEDA YASSLVALLQ
DVSDGTTRNL GGMIRFIERS LDAEATHEID DNPGGDSITV QTIHAAKGLE HPIVIVANIN
RYSFPPAGGG DDRIRFEDPI GLRQTKLSST AHGQPHLYDN WRYRVLSACL GRDYDEERRL
LYVAMTRAQD HLLFSAGAEP SPLFENLPLE PESVEPDLEE SRIDRTEQTR LQVSIPEPDV
PAGQSPHALM DDRVFEDRDD GRGIEFGNRV HEFAEQYADG EAVEPASDDE RRVRDFIDEL
EGELHVEEDA YLPVSVGEQE VTISGVIDLL HVTGDRVEIV DYKTDRTRDA ETEYRKQLSV
YYHVVRQLYP DREIEPSLFY SGKGTVVAID PLSMESLSDL VKIERESNRS DQGENPTIR
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