| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1918 |
|---|
| Symbol | |
|---|
| ID | 8384209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 1936927 |
|---|
| End bp | 1939119 |
|---|
| Gene Length | 2193 bp |
|---|
| Protein Length | 730 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644972986 |
|---|
| Product | PglZ domain protein |
|---|
| Protein accession | YP_003130820 |
|---|
| Protein GI | 257052987 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCTA CCCAAACTCT CCCTGACGCT GCAAAAGACA CAATCCGCCG CAAATTCGAC
CGCGCAGAGT CGAACGACCC GATCGTTCTC TGGTGGGACG ACGGTAACTA CCTCGAAGAC
ATCCTCCAGC AGGCCTGTGC CGAACTCGGC GTCCCGCTGA AGACTGCCGA AAAAACACCG
CTGGAACTCC GTGCTGACCC AGTCGACGGT GAGCAGGTCT GGTACGTTCC ACACGTCAAA
GAGCCAGCCG ACAGAGAAGG TGACTACGAC TGGTTTCGGG ACGTCCAGCA CACGGGGAGC
GAGGTGGAGA TGAGCATCGA GGATCTCACC GTCCACGTCT TCGGGAGCGA ACAGCTCCAA
GCGTGGGAAC TGAAGAACGC CACCCAATCC GACAACCCTC AGCAGCGCCG GGAGATCGCG
CGAATCCTCC ACGACCAACT CACCGGCGGC CAGCTCCCGA CGCTCGAACA ACTCCGTACC
CAGATCGTCA CCGGGGGCTA TACCGATCCG GTGGCGTTCG TGCTGGAGAA CGGCTGGGCA
GATATCGACG ACGATCCCCA GACCGTCGAC CAGATGAAGG ACTTGCTGAC CAGCGAGGGC
GTCGACGCGG TCGCCGACGA GAGCGAGCCT ACGACCATCG AAACCCAGAC GCGTCGGTGG
GCGGTCGCGG AGTGGTTGAT TCACGCTGGC GCCGACGCCG ACCGCTTCCC CAGCAAGTTC
CGGGCCGAAA CCGCCGGCGC TCACGACCTG CCGGAACTCA AGTCACTGCT GAACAACACG
ACCTCGCCCG ATCTGATCGC CGACCGCTAC CTCGGGGAGG CGGTGTGGCC CGACGTAGTC
GATACCATCG ACGATCCGTG GGAACTGTCG AGTTGTATCG TAGACGCTGC ACTCGAACGC
CGTCTCTGGG ATGAGTGGCA CGCGTCCTTC GACGTCGGTG ACTACGAGGA GTGTCTCGAT
CGTGCCGAGG AACGGTACGA AGCCCTCCTC GGGAGCGAGG ACATCCACGG GAACTACCGA
GGCGCATACG GCCCGGATAG CCCGTGGACG CAAACGTGGG AGCAGGCCGC CGAGGTGGCC
CGTCTCGCAC ATCAGCTCGA CACGTGGGAC GAGAACGTGA ACGACGACGT CGTCTCCCTG
TACGCGGACG AGGATGACGG TACGTGGCAG ATCGACAACG CCATCCTTAA TCTCGTCGTC
TCCGGCGAAC CGGAGACTGA CCTTCCCGGC AACCACCCGG CGACCAAAAC GCTGGACGAC
CTCCGCACCC AGCTCCAGTC GGAGTACGTC GACTACCTCG AAGACCTCGG CGACCTCGTC
ACTGAGACCA TCGAGGCTGG CGCTCCATTC GTCGACGAGG ATCACGCCTA CCAGTTCTTC
ACCAAGGAAT CCGACGGCCT CGAGAGCGGG CAGACGGTCG CGCTGTTCGT CATCGACGCC
CTTCGACTCG ACCTTGCCCG TCGCCTCGCG GACGAACTCC GCGAGTACGT GGCGACCATC
CCGGCCGACG CGCCCGAGTT CGCCGTCGAA GAGAGTGTCT GGCTCGGGAC ACTACCCTCG
GAGACCGAGT TCGGGAAGGC CGCCCTCACG CCCGGTGAAG TCCAGATGTT CGACATCTCG
CTCGTCGATG GCGACCTATT GCCGCTCCGC AACAACCGTG AAGTCAACAC AAACCGACGC
AACTCGCTGC TGGATGGTGA CGGCTGGACG GTCACGCGCG AGGAAGACGA GGGCTGGCAG
TCGACGCGTG TGGCCTACTT CAAGAATGAC CTCGACAATA TGGGTGAGAA GGAACTCAGC
GATCTCGAAG AGATGCTTGC CCAGCGTGTC GACTCTCTCG CGGAATTCAT TGGCACGAAG
GTCGAACAGG GCGAGTGGGA TCAGGCCTAC GTCCTGACCG ACCACGGGTT CGTCCTCCTG
CCTCACGACG TAACCCCGGG GAAAATCTCA CGACCGACGG AGTCGACAGA CTCCGGTCGT
CGGTGGGTTG CCGGCGAGAA CGTCGACGAG GACTCGCCCG GTGTGCTGCT CGACGCCAGC
ACTCGGTTGG GATATCTCGA CGCCAACGTC AGCGCCTTCG CGAGCCCGCT CAGGCGGTTC
AGCAAGCAGG GTGTCGGCGA CGCCCGCTTC TACCACGGCG GTCTCCTTCC ACAGGAGTTC
GTACTCGACT TCATCAGCAT CACGCAAGGG TGA
|
|---|
| Protein sequence | MQATQTLPDA AKDTIRRKFD RAESNDPIVL WWDDGNYLED ILQQACAELG VPLKTAEKTP
LELRADPVDG EQVWYVPHVK EPADREGDYD WFRDVQHTGS EVEMSIEDLT VHVFGSEQLQ
AWELKNATQS DNPQQRREIA RILHDQLTGG QLPTLEQLRT QIVTGGYTDP VAFVLENGWA
DIDDDPQTVD QMKDLLTSEG VDAVADESEP TTIETQTRRW AVAEWLIHAG ADADRFPSKF
RAETAGAHDL PELKSLLNNT TSPDLIADRY LGEAVWPDVV DTIDDPWELS SCIVDAALER
RLWDEWHASF DVGDYEECLD RAEERYEALL GSEDIHGNYR GAYGPDSPWT QTWEQAAEVA
RLAHQLDTWD ENVNDDVVSL YADEDDGTWQ IDNAILNLVV SGEPETDLPG NHPATKTLDD
LRTQLQSEYV DYLEDLGDLV TETIEAGAPF VDEDHAYQFF TKESDGLESG QTVALFVIDA
LRLDLARRLA DELREYVATI PADAPEFAVE ESVWLGTLPS ETEFGKAALT PGEVQMFDIS
LVDGDLLPLR NNREVNTNRR NSLLDGDGWT VTREEDEGWQ STRVAYFKND LDNMGEKELS
DLEEMLAQRV DSLAEFIGTK VEQGEWDQAY VLTDHGFVLL PHDVTPGKIS RPTESTDSGR
RWVAGENVDE DSPGVLLDAS TRLGYLDANV SAFASPLRRF SKQGVGDARF YHGGLLPQEF
VLDFISITQG
|
|---|
| |