Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1897 |
Symbol | |
ID | 8384188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 1908396 |
End bp | 1909235 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644972965 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_003130799 |
Protein GI | 257052966 |
COG category | [K] Transcription |
COG ID | [COG1378] Predicted transcriptional regulators |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGGGG AACAATCTGA GTCGACTGCG GAGGATCGAT CCGTCGTCGA GGAGGTTGTC GGGTTACTCG AGACGCTGGA TTTTACCGAA TACGAGGCCC GGTGTTTCGT CGGGCTCGAG CGGATCTGCC AGGGGACGGC AAAGGAGGTC AGCGAGGTCG CCGACGTCCC ACGTGCCCGT GTCTACGATT GTATGGATGG CCTCAAGGAA CGTGGGCTGG TCGACGTCCA GCAGGGAACG CCCCGGGAGT TCCGGGCCGT CGATCCCGAC GAGGCGGTGT CGATGCTCGA TCGGCGGCTC TCGACGGTGC TCGATCGGAT CGGCACGCTC CTCCCACGAC TTCAGCCGCC GGCCGCAGAG ACGGAGGACG GCGACGTCTG GGTCATGGAG GGCGACGCCG AGGTCAGCGA GCGCATGGAA GGCCTGCTCG ACGACGCGAC CGACGAGGTC TTGCTTGCCA TCGCGGTCGA GGAGTTGCTG ACCGACGAGT TACTCACGGC GTTGCGGGCG GCCAGCGATC GCGGCGTCGA GATCGTCATC GGCTCGCCGG CCGAGTCCGT CCGGGAGCGA CTGCGAACGG CGCTGCCCGA TGCCCGTGTG CTGGAAACCT GGACGTGGTG GGACTCCCAC CCGATCCAAC CCGGGGCCGT GAGTGCGATC CTCATGGTCG ACGGCGCTCA GTTGCTCGTC AGTGCCGACA TCCAGACGTC GCTGCCCGGC GTTCGCAAGC ACCGCGCGGT CTGGACCGAC GGCGATACCG CGCCACTGGT GGGAATGATG CGCCCGCTGC TCGCCGACGC GATCCAGCGC GGTGAGGAAC GGGCGGAAGC GACATCGTAA
|
Protein sequence | MTGEQSESTA EDRSVVEEVV GLLETLDFTE YEARCFVGLE RICQGTAKEV SEVADVPRAR VYDCMDGLKE RGLVDVQQGT PREFRAVDPD EAVSMLDRRL STVLDRIGTL LPRLQPPAAE TEDGDVWVME GDAEVSERME GLLDDATDEV LLAIAVEELL TDELLTALRA ASDRGVEIVI GSPAESVRER LRTALPDARV LETWTWWDSH PIQPGAVSAI LMVDGAQLLV SADIQTSLPG VRKHRAVWTD GDTAPLVGMM RPLLADAIQR GEERAEATS
|
| |