| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1895 |
|---|
| Symbol | |
|---|
| ID | 8384186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1905643 |
|---|
| End bp | 1906893 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644972963 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003130797 |
|---|
| Protein GI | 257052964 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGG AGGTCGACCA CGCCGCCCGT GCCCGTGACG TCCTCGGGTT CTCGCGGTGG
TGGCTGGTGC TCGCGGCCGC GGCCATGATG GCCGTCGTCG GCCCCTACCA GTACGTCTGG
AGCAGTCTCC GGGATCCAGT CGCGACCAAC CTGGGGATCG ACAGCGCCGC ACTGTCGACG
GTGTTCACGC TGTTCGTCGT CGTCCAGGCC GGGAGCCAGT TCCCGGTCGG GTGGTGGCGT
GATCGACACG GTCCCCGCGC GGTGAGTGTC GCCGCGGCTA TCCTCGCCGG CGGCGGCTAC
CTCGGCCTCT CAGTGGCCGA GACGACCTGG GAGATCTATC TCGCCTATTC GCTGGGAGCC
CTGGGCGTCG GCATCGTCTA CACCGTCGCC GTCAACACCG CGTTGAAGTG GTTCCCTGAC
CGGCGTGGAC TCACCGCGGG GGTCGGTACG ATGGCCTTCG CGGGGGGGAG CGCCGCCTTG
GTCCCCTACG TTCGGGCGAA TACCGGCGCG GGTGCGCCCG TGACGGCATA CGTCGGCGTC
CTCCAGCAGG TCGGCGTCGT GATCTTCGCG GTCGTGCTCG TCGGTGCGCT GGTCCTCCGG
GACCCACCCG AGGGATGGCT GTCCGACGGC AGCGTCACCG ACACGGGCCC ACAGTTCACC
TGGCGGGAAA TGGTCCGAAC CCGGCAGTTC TGGCTCATGT ACGCCATGTT CGTCGCCGTC
TCTGGGGCCG GCCTCATGCT GACCGAGAAG ATCGTCTCCT ACGCCGACCA CCTGGGACTC
GCGGGCGTGA TCGCCACGGC AGCCGCGACC CTCCTTCCGC TGGCCGGCGG CATCGGCCGA
CTCGTGCTGG GTGAGGTCAG CGACCGGGTC GATCGGACCA ACGCGATGGC CGGGGCGTTC
ACGCTCTGTG GCCTCGGCCT GTTCGCCGTC GCGTACTTCG GCGTCAGCGG GATGGGGAGT
GCCTTCGTCG TGGCAGTCGT CGTCGCCACC TTCTTCTGGA GCCCGCAGTT CACGCTGTTC
CCCAGCGTCG TCGGTGACTA CTACGGCGAG AAACACTCGA GTGCGAACTA CGCCCTGCTT
TACTCCGGGA AGATCTGGGG CGGCGTCTTC GGCGGGACCG TCACGGGTGC CGCCGTCGTC
GCCGTCGGCT GGACGGAAAC GTTTCTGCTC GGGGGCACAC TGGCCGTCCT GGCAGGTGTG
GCTGCCCTCG GACTCGACGC GCCGTCGCCA CCTGACGCCG ACAAACGCTG A
|
|---|
| Protein sequence | MNEEVDHAAR ARDVLGFSRW WLVLAAAAMM AVVGPYQYVW SSLRDPVATN LGIDSAALST
VFTLFVVVQA GSQFPVGWWR DRHGPRAVSV AAAILAGGGY LGLSVAETTW EIYLAYSLGA
LGVGIVYTVA VNTALKWFPD RRGLTAGVGT MAFAGGSAAL VPYVRANTGA GAPVTAYVGV
LQQVGVVIFA VVLVGALVLR DPPEGWLSDG SVTDTGPQFT WREMVRTRQF WLMYAMFVAV
SGAGLMLTEK IVSYADHLGL AGVIATAAAT LLPLAGGIGR LVLGEVSDRV DRTNAMAGAF
TLCGLGLFAV AYFGVSGMGS AFVVAVVVAT FFWSPQFTLF PSVVGDYYGE KHSSANYALL
YSGKIWGGVF GGTVTGAAVV AVGWTETFLL GGTLAVLAGV AALGLDAPSP PDADKR
|
|---|
| |