Gene Huta_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1878 
Symbol 
ID8384169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp1883906 
End bp1884610 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID644972947 
Productprotein of unknown function DUF502 
Protein accessionYP_003130781 
Protein GI257052948 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCACGAA CGCACACACT CAGACGGAGT TTCGTGGCGG GGCTGTTCCT CGTCGCCCCG 
CTCGTGGTCA CGATCGTCGC GCTCAGACTA CTGATCGGGT GGCTGTCAGG GTTCGTGGAT 
CCGATCGTCG CGGCGACCGC ACTCTCCCAG TACACGGCGA ACATCACGCT GGTCGCGCAG 
GTCATCACCT TCCTGACGCT GGTCGTCGTG ATCACCGGGC TGGGGTATCT CACCCAGCGG 
TCGATCGGCG ATTGGGCGTT CGCGTGGTTC GACCGGGTGT TCGGCATCGT CCCCGTCGTG 
CGGGTCATCT ATACGAGCGT CCGCCAGATG ACCCAGGCGC TACGCAACCG GGAGAACCGC 
TACGAGAACG TCGTGCTGAT CGAATATCCA CGCGAAGGGC TGTTCGCCAT CGGGTTCGTC 
ACCGGCGAGA GTCCGGCCTC GACCCACGCA GTCACCGGCG AGGCGTACAA CGTCTTCGTC 
CCGCACAGCC CGAACATCAC CGGCGGGCGA CTCGTCCTCG CGCCGGAAGA CACCATCCAC 
GAGGTCGACA TCAGCGTCCG CCGGGCCATC CGACTGCTGA TGACGACCGG CATCGCCGAG 
GAACAGTCCG ACATCGACGC ACTCGCCGCC GAGACCGACG TCGACATCCC GGACGCCGCG 
GCGTTCGAGG GCACGCCGTC AGCCGAGGAA AGCGACGACG CATAG
 
Protein sequence
MSRTHTLRRS FVAGLFLVAP LVVTIVALRL LIGWLSGFVD PIVAATALSQ YTANITLVAQ 
VITFLTLVVV ITGLGYLTQR SIGDWAFAWF DRVFGIVPVV RVIYTSVRQM TQALRNRENR 
YENVVLIEYP REGLFAIGFV TGESPASTHA VTGEAYNVFV PHSPNITGGR LVLAPEDTIH 
EVDISVRRAI RLLMTTGIAE EQSDIDALAA ETDVDIPDAA AFEGTPSAEE SDDA