| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1833 |
|---|
| Symbol | |
|---|
| ID | 8384122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 1841426 |
|---|
| End bp | 1842526 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644972900 |
|---|
| Product | Protein of unknown function DUF373 |
|---|
| Protein accession | YP_003130736 |
|---|
| Protein GI | 257052903 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2237] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGG TCCTGTGCGT GGATCTCGAC GACGACATCG GCCGGAAGAC CGGCATCGAA
ACGCCGGTCG TGGGTCGCGA CGCCGTCGAG AGCGCCGCAG TCGAGTTCGC GACGGCCGAT
CCAGAGGACA GTGACCTCAA CGTGTTGTTC GAGGGGATCC ACCTCTACGA CGAACTCGAT
CGCGCCGGCG AGTCCGTCGA AGTCGCTGCT GTGACCGGGA TCGAGGGCAG TGACGTCGCT
GCCAATCGGG CCGTCGGTGT GGAGATCGAC ACCGTCCTCG CGGGATTGAC GACCGGCGAG
GACGTCCGTG CGGTCATCGT CACCGATGGC GCACAGGACG AAAGCGTCGT GCCCGTGATC
CGTTCGCGGG TCGACATCGA CGGCGTCCGT CGGGTCGTCG TCCGCCAGGC CCAGGATCTG
GAATCGATGT ACTACACCAT CAAACAGGTG CTCAACGACC CCGAGACTCG GGGGACGATC
CTGGTCCCGC TCGGGATCCT GTTGCTCATC TATCCGCTCG CCGTCATCGC GAACTTCCTC
GGCATGCCCG GCGACGTGTT CGGGCTTGCG TCGGGGTTGC TCGGCATCTA CATCCTCTCG
CGGGGACTCG GACTCGGGGA CGCCGTCGAC GGCGTCGTCG ATCGAGCTCG ATCCGGGCTG
TACGCTGGCC GGGTGACGAT TGTCACCTAC GTGGTTGCCG GGGTGTTGCT GGCGATCGGT
GGCGCGAGCG GGTTGGAGAT GCTCGACACC GTCCGCGGCG GGCTGGAATC TGCGACGCTG
GGTGCGACTC AGGCTGTGGC CGCGGTGCTC GCGGGGGCGA TCCACTGGCT CGCCGCCGCC
GGGATCACTA GCAGCCTCGG CCAGGTGACC GACGAATATC TTGCCGGACG ATTCCGGTGG
CGATATCTCA ACGCCCCGTT CTACATTCTC GCCATCGCCG GTGTCATCCA CGCCGTCAGT
CTGTACGTCC TCGGCCGGGT CTCCCTTTCG TATCTCGCGG CGATGCTCAC CGCCGGGACG
CTGTTGGGAC TGTTCAGCAC GCTCGCGTTC GCCATTGCCG AGGATCGCCT CGAGAGCGCC
GAGTCCCAGG CTAGCGCGTG A
|
|---|
| Protein sequence | MLLVLCVDLD DDIGRKTGIE TPVVGRDAVE SAAVEFATAD PEDSDLNVLF EGIHLYDELD
RAGESVEVAA VTGIEGSDVA ANRAVGVEID TVLAGLTTGE DVRAVIVTDG AQDESVVPVI
RSRVDIDGVR RVVVRQAQDL ESMYYTIKQV LNDPETRGTI LVPLGILLLI YPLAVIANFL
GMPGDVFGLA SGLLGIYILS RGLGLGDAVD GVVDRARSGL YAGRVTIVTY VVAGVLLAIG
GASGLEMLDT VRGGLESATL GATQAVAAVL AGAIHWLAAA GITSSLGQVT DEYLAGRFRW
RYLNAPFYIL AIAGVIHAVS LYVLGRVSLS YLAAMLTAGT LLGLFSTLAF AIAEDRLESA
ESQASA
|
|---|
| |