| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1820 |
|---|
| Symbol | |
|---|
| ID | 8384108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1825861 |
|---|
| End bp | 1826349 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644972886 |
|---|
| Product | protein of unknown function UPF0066 |
|---|
| Protein accession | YP_003130723 |
|---|
| Protein GI | 257052890 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1720] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.958931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTCG AAGTGACACA GATCGGCACG GTACGCAACG ATTTCGAGAC ACCTGTCGGT
CCCGAGGAGA TGGCCGATCA CGAGAGTACG ATCGTCATCG ACGAAGACTA CGCCGAGGGG
CTGTACCGTA TCGAGGACAA CGACTACGTC ACTGTCCTGT GGTACCTCCA CGAATCCGGC
GAGCCGAGCC TTCGAGGGCC GCGACGCTAC GGAACCGAAC GTGGGATCTT CGCCTGCCGG
AGTCCGAATC GCCCGAGCCC GATCGGGACG ACTACCGTCG AGTTGCTGGA ACGCGAGGGT
CGGGAATTGC GGGTTCACGG ACTCGACGCC ATCGACGGGA CGCCGGTGCT CGACATCAAG
CCATACGCGC CCAACTTCGA TCGACCCGAC CATGTGGCCG ACCGCCGCGA GAATCACGGT
GGCCGAATCG AGGGTCCCAG CGCCGACCGT GATGGACGGG CGCGGGAGGT CGGCGGAGAC
GAACAGTGA
|
|---|
| Protein sequence | MTFEVTQIGT VRNDFETPVG PEEMADHEST IVIDEDYAEG LYRIEDNDYV TVLWYLHESG
EPSLRGPRRY GTERGIFACR SPNRPSPIGT TTVELLEREG RELRVHGLDA IDGTPVLDIK
PYAPNFDRPD HVADRRENHG GRIEGPSADR DGRAREVGGD EQ
|
|---|
| |