Gene Huta_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1808 
Symbol 
ID8384096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1816533 
End bp1817537 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content62% 
IMG OID644972875 
Producthypothetical protein 
Protein accessionYP_003130712 
Protein GI257052879 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.846437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGAT CAGTCGCTCG GGTGTTTCCC GGCATAGTGT TGCTCGCACT CGGCGGTGGG 
CTCGCACAGT TGCTTGCGGG GACAGTCGTG CCGATCAATG AATTGATCGT GGCGGTTGGG
CTCGGTGCAC TCCTCGCCAA TACGGTCGGC ACTCCGGCCT GGGCGAAAGG CGGCATCGCA
ACGCACAAGC TCTGGCTGGA AACCGGTATC GTCCTCATGG GCGCACGGAT CGCGATCGGA
CAGCTGTTCA GCGTCGGGCC GTCACTGCTG GTGTTCGTCG TCGGGTTTCT GACGATCAGC
CTTGTGATCG GTGAGGCGAT CGCACGCAAT GTCTTCCGGA TCAACGAGCG GTTGGGGTCG
CTGTTGGCGG CCGGGTACGC CGTGTGTGGG GTTTCAGCCA TCGTCGCCGT CTCCGGCAGC
GTCCGCGCCA AAAGCGAGCA GATCGCCTAC GCCGTCGCGA CGATTCTGCT GTTCGATGCC
GCCACGCTGG CGGTCTATCC GATCATCGGT CGCCGCCTCG AGTTACCGGA CATCGTCTTT
GGCACCTGGG CCGGAGTCAG TATGGTTTCG ACGGGGCCCG TCATCGCAGC CGGTTTCGCC
TATTCGCCAC AGGCCGGAGA GTGGGCCACC GTGACGAAAC TCGGCCGGAA CGTCTTCATC
GGGGTCGTCG CCGTCCTCTA TGCGGTGTAT TATGCCCGAC AACGCGATAC CGGACAGGCC
GGCGGTGCCA GTTGGCGATA CCTCTGGGAG GAGTTTCCCA AGTTCGTCAT CGGCTTTCTC
GCAATGGCAG GAATCGCGAG TCTCGGGTTG CTTTCTTCGG ACGACGTTGC ACTCCTCACG
TCGGGCTACC AGGGGTTGTT CCTCGTGGCG TTCGTCGGTC TCGGCATGGA GATCGACCTC
CGGAAGATGC GGTCGGTCGG GATCAAACCA GTGTTGGTCG TCTTCTCGTC GCTGCTCGTC
GTGAGCTTGC TCTCCTTGCT CGCGTCGATG CTGCTGTTCG GTTGA
 
Protein sequence
MRRSVARVFP GIVLLALGGG LAQLLAGTVV PINELIVAVG LGALLANTVG TPAWAKGGIA 
THKLWLETGI VLMGARIAIG QLFSVGPSLL VFVVGFLTIS LVIGEAIARN VFRINERLGS
LLAAGYAVCG VSAIVAVSGS VRAKSEQIAY AVATILLFDA ATLAVYPIIG RRLELPDIVF
GTWAGVSMVS TGPVIAAGFA YSPQAGEWAT VTKLGRNVFI GVVAVLYAVY YARQRDTGQA
GGASWRYLWE EFPKFVIGFL AMAGIASLGL LSSDDVALLT SGYQGLFLVA FVGLGMEIDL
RKMRSVGIKP VLVVFSSLLV VSLLSLLASM LLFG